| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5240 |
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| Symbol | |
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| ID | 8547652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7198115 |
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| End bp | 7201318 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646389914 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_003269618 |
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| Protein GI | 262198409 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0916466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.569995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTCA TAGAAAAACT CTTCGGCAGC AAGAACGACC GCGACATCAA GAAGCTACGG
CCCTTGGTGC AGCGCATCGG CGACCTCGAG CCCGACATGA AGGCCAAGAG CGACGCCGAG
CTCCAGGGCA TGACCGCCGT CTTCAAGGAG CGCCTCGACC AGGGCGCGTC GCTCGACGAC
CTGCTGCCCG AGGCCTTCGC CACCGTGCGC GAGGCCGGCT GGCGCGTGCT GGGCATGCGC
CACTTCGACG TACAGCTCAT CGGCGGCATG ATCCTGCACC GCGGCAAGAT CGCCGAGATG
CGCACCGGTG AGGGCAAGAC CCTGGTCGCC ACCCTGCCCG CCTACCTCAA CGCGCTGCCC
GGCCGCGGCG TCCACGTGGT CACGGTCAAC GACTACCTGG CCCGACGCGA CGCCGCCTGG
ATGGGTCGCC TCTACGGCTT CCTCGGTCTC GAGGTCGGCG TCGTGATCCA CGGCCTCGAC
GATTACGCCC GTCAGCGCCA GTACAACGCC GATATCACCT ACGGTCAGAA TAACGAGTTC
GGCTTCGACT ACCTGCGCGA CAACATGAAG ATGTCGCCCG ACCGCATGGT GCAGCGCCAT
CACGCCTACG CCATCGTCGA CGAGGTCGAC TCGATCCTCA TCGACGAGGC CCGCACCCCG
CTCATCATCT CGGGCCCGGC CGAGCGCTCG GCCGATCTCT ACAAGACCGT CGATCGCGTG
GTGCCCAAGC TCAAGCGGGA TATCGACTTC ACGGTCGACG AAAAAGCCCA CTCGGCGATG
CTCACCGACG CCGGCGTCGA GAAGATCGAA GAGCTGCTCG ACATCGAGAA CCTCTACGAC
CCGGCCAACA TCGCCTACAA CCACCACGTG GCCCAGTCGC TGCGCGCGCA CACGCTGTAC
AAGCGCGACG TCAACTACCT GGTGCAAAAC AGCAAGATCG TCATCGTGGA CGAACACACC
GGCCGCACCA TGCCGGGCCG TCGCTGGTCC GACGGTCTGC ACCAGGCCAT CGAGGCCAAA
GAGGGCGTCA AGATCGAGGA GGAAAACCAG ACCCTGGCGA CGATTACGTT CCAGAACTAT
TTCCGCCTCT ACGACAAGCT CTCGGGCATG ACGGGTACCG CCGACACCGA GGCGCCCGAG
TTCCACCAGA TCTACAAACT CGACGTCACC GTCATCCCGA CCAACAAGCC CATCGCCCGC
GATGACGCTC CCGACCTGGT GTACAAAAAC GAGCGCGGCA AGTTCCACGC AGTGATCGAC
GAGATCAAAG AGGCGCACGA GAAGGGCCAG CCGGTGCTGG TCGGTACGGT CTCGGTCGAG
AAGTCCGAGG TCGTGGCCAA CCAGCTCAAG AAGGCCAAGC TGCCCTTCCA CGTCCTCAAC
GCCAAGCATC ACCAGAGCGA GGCGTCGATC GTCGCGCAGG CGGGCCGCAA GGGCTCGATC
ACCATCTCGA CCAACATGGC CGGTCGCGGT ACCGACATCG TGCTCGGCGG CAACGCCGAG
GCCATGGCCA AGGACGAGCT CGAGCAGGAG CGCGCCGCCT TCGTCGCCGA GCTGGCGGAC
AAGCGCAAAG AGCAGCGCAA GAGCCTGCAA AAGGCCGAGG ACAGCGAGGC CCTGGCCGCG
CTCGACGAGG CCCTCGAGGA CGAGGGCTTC GACGAGGAGG GCCGCCTCGC CGAGCTGCTC
GCCAAGTACG AGAAGCAGTG TTCGGCCGAG CGCGAAGAGG TGCTCGAGGC CGGCGGCCTC
AAGATCGTCG GCACCGAGCG CCACGAGTCG CGGCGCATCG ACAACCAGCT CCGCGGCCGC
GCCGGCCGTC AGGGTGACCC GGGCGCCTCG CGCTTCTACC TGTCGCTCGA GGACGATCTA
CTGCGCATCT TCAATGCCGA CTTCGTCACC CGCTGGATGG AGCGCCTGGG CATGGAAGAG
GACGTGCCCA TCGAGAGCGG CATGGTCACG CGCGCCATCG AGAAGGCGCA GAAGCAGGTC
GAGGGGCGCA ACTTCGACAT GCGCAAAAAC CTGCTCGAGT ACGACGACGT GATGAACCAG
CAGCGCAAGA CCATCTACGG CTTGCGCCGC CAGATTCTCG AAGGTCGCTA CGCGCCCGAG
CTGAGCGACG AGGAGCGCAA GGCCGGCAAG ACGCCCGAGG TCCCGACCGA GAGCGGCGAC
TGGACCGTGG CCAAGCTGGA GAAGGAGACC CAGGAGGAGA TCCAGACCCT GGTCACGCGC
GTCGCCGAGG CCTACAAAGC GCAGCACGAA AAGCTCGCCG AGCAGGAAGA CGAGGACGGC
GACGACCTGC CGCCGCTGTG GCGCGTGCTG CGGCACGAGC TGTGGCGCAC CACGGGCACC
CTGTGCGATG TGGAGCGGCT CTACGGCAAG GCCGGGGCCT CGCTCAGCGA GGAAGAGATC
GCCCGGATGG CGGCCTCCAC CGAGGTGGTG TCGCAGATCG CGGCCTCGCT GGTGCAGCAG
CGCGAGCGCC TCTACGACCT GTGCGATACG GTGATCGGAC AGTTGGTCGA CAGCAAGTGC
CCGCCCGGCA GCAACGACGA CGACTGGGCG CTCGACGAGC TCCAGGACAG CCTGCGCGAG
CACTTCCACA CCGCCGTCGA GGTGCCGCGC AACGCCGCCA GCCAGGAGGA GATCGCCCAG
AAGGTGTGGG GCCAGGTCGA GCGCCGCATC GACGAGCGCA TCGAGGAGCT GGGGCGGCCG
TGGCTGCTGT ACTTCGTGCG CCACTTCTTC CTCGAGGAGA TCGACCAGCA GTGGGTCGAT
CACCTCAAGA CCATGGACCA GCTCCGCGAG GGTATCGGCC TGCGCGGCTA CGGCCAGAAG
GATCCCAAGA AGGAGTACAA GAAAGAGGGC TTCGACCTCT TCGGCGGCAT GATGGAGCGC
ATCCAGAGCA ACGTGTGCTC GAAGATCTTC CGGGTGCAGA TCCGCCGCGA GGAGGACGAG
ATTCCCGAGC TGCAGGCCAA GCAGCGCCGC ACCACGGCCG TGCATCCCAC CGCCGGCACC
GGCGCCGCCG AGCCCAGCAC CGAGGCCGAG GCGAAGTCCT CGACCTACGG CGACGCCGCC
GACGGCGGCA AGGAGCCGGT GCAGAAGCAG CAGACCGTGC GCCGCGACCG CCCCAAGGTC
GGCCGCAACG ACCCCTGCCC CTGCGGCAGC GGCAAGAAGT ACAAGAAGTG CCACGGCCGG
CCGGGCGCTG AAGCCTCGGC CTGA
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| Protein sequence | MGFIEKLFGS KNDRDIKKLR PLVQRIGDLE PDMKAKSDAE LQGMTAVFKE RLDQGASLDD
LLPEAFATVR EAGWRVLGMR HFDVQLIGGM ILHRGKIAEM RTGEGKTLVA TLPAYLNALP
GRGVHVVTVN DYLARRDAAW MGRLYGFLGL EVGVVIHGLD DYARQRQYNA DITYGQNNEF
GFDYLRDNMK MSPDRMVQRH HAYAIVDEVD SILIDEARTP LIISGPAERS ADLYKTVDRV
VPKLKRDIDF TVDEKAHSAM LTDAGVEKIE ELLDIENLYD PANIAYNHHV AQSLRAHTLY
KRDVNYLVQN SKIVIVDEHT GRTMPGRRWS DGLHQAIEAK EGVKIEEENQ TLATITFQNY
FRLYDKLSGM TGTADTEAPE FHQIYKLDVT VIPTNKPIAR DDAPDLVYKN ERGKFHAVID
EIKEAHEKGQ PVLVGTVSVE KSEVVANQLK KAKLPFHVLN AKHHQSEASI VAQAGRKGSI
TISTNMAGRG TDIVLGGNAE AMAKDELEQE RAAFVAELAD KRKEQRKSLQ KAEDSEALAA
LDEALEDEGF DEEGRLAELL AKYEKQCSAE REEVLEAGGL KIVGTERHES RRIDNQLRGR
AGRQGDPGAS RFYLSLEDDL LRIFNADFVT RWMERLGMEE DVPIESGMVT RAIEKAQKQV
EGRNFDMRKN LLEYDDVMNQ QRKTIYGLRR QILEGRYAPE LSDEERKAGK TPEVPTESGD
WTVAKLEKET QEEIQTLVTR VAEAYKAQHE KLAEQEDEDG DDLPPLWRVL RHELWRTTGT
LCDVERLYGK AGASLSEEEI ARMAASTEVV SQIAASLVQQ RERLYDLCDT VIGQLVDSKC
PPGSNDDDWA LDELQDSLRE HFHTAVEVPR NAASQEEIAQ KVWGQVERRI DERIEELGRP
WLLYFVRHFF LEEIDQQWVD HLKTMDQLRE GIGLRGYGQK DPKKEYKKEG FDLFGGMMER
IQSNVCSKIF RVQIRREEDE IPELQAKQRR TTAVHPTAGT GAAEPSTEAE AKSSTYGDAA
DGGKEPVQKQ QTVRRDRPKV GRNDPCPCGS GKKYKKCHGR PGAEASA
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