Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5238 |
Symbol | |
ID | 8547650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7195416 |
End bp | 7196387 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646389912 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003269616 |
Protein GI | 262198407 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.29276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCTG GTGAGCGCGG GGCGAGCGCG GGCGCCACGC CCGAGCGCCG CAAGGTAGTC ATCACCGGCA TCGCCGGACG CCTGGGCCAC ATCGTCACCC AGATGCTGCA TCGCGATGAC GGTTACCAGG TGGTCGGACT CGACCGTCGG CCCTTCCGCG ACAAACCCCG CGACGTCGAG CACCATCAGT TCGACCTGCG CTCCAAGCGC ACGCGCGAGC TCTTCCGCCG CGGCGACGTC TACGCGCTCC TGCACCTGGG CGTGCTGCAC GCGCCGCGGG CCACGGACCG CGAACTCTAC GAGTGGAACG TGGGCGGGAC CGCGCGGCTG CTCGAGTACT GCATGGCCTA CGAGGTGCCC AAGGTCATCC TCGTGTCCTC GGCCAACGTC TACGGGCCGC GGCCCGAGAA CACCCAGTTC CTCACGGAAG AGTCGCCGCT GCTCGCGGCC CAGGCCTTCC CGCGCATGCG CAACCTGGTG GAACTCGACC ACATGGGCGC GTCCTTCTTC TGGCGGGCGC GCGACATCGA GACCGTGATC CTGCGGCCGG TGCACATCCT CGGCCGGGTG CGCAACGCGC CCTCGAACTA CCTGCGCCTC GATCCTATCC CCACCCTGCT CGGTTTCGAT CCCATGATCC AGGCGGTGCA CGAGCGCGAT GTGGCCCGCG CCATCGGCCG CGCGCTCGAG CCCGGCGCGC GCGGCATCTA CAACATCACC GGCCCGGGCG AGCTGCCGCT GTCCGAGATC GCGCAGGAGC TCGGCCGGCG CACCATCCCG ATCCCGCACC CGCTGGCCAA GCCGCTGTGG TCGCTGGCCT TCCGCCTGGG CATGTCGAGC TACCTGGTCG ATGAGTTCGA CTTCATCCGC TACGTGTGCA TGGTCGACGG CAGCCGCGCC CGCACCGAGC TCGGCTTCCA GCCGCACTAC TCGCTGCGCG AGACCATCCA CGCGGTGATG GCCAGCGCCT GA
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Protein sequence | MSSGERGASA GATPERRKVV ITGIAGRLGH IVTQMLHRDD GYQVVGLDRR PFRDKPRDVE HHQFDLRSKR TRELFRRGDV YALLHLGVLH APRATDRELY EWNVGGTARL LEYCMAYEVP KVILVSSANV YGPRPENTQF LTEESPLLAA QAFPRMRNLV ELDHMGASFF WRARDIETVI LRPVHILGRV RNAPSNYLRL DPIPTLLGFD PMIQAVHERD VARAIGRALE PGARGIYNIT GPGELPLSEI AQELGRRTIP IPHPLAKPLW SLAFRLGMSS YLVDEFDFIR YVCMVDGSRA RTELGFQPHY SLRETIHAVM ASA
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