| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5230 |
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| Symbol | |
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| ID | 8547642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7188693 |
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| End bp | 7189361 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646389904 |
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| Product | peptidase C39 bacteriocin processing |
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| Protein accession | YP_003269608 |
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| Protein GI | 262198399 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.19192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.129985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAAAA CCCAAAAGCT CGTACGGCGG CTGCGGCCGC ACCAGGCGCC GCGCTTCCTC
ACCACCCAGC CGCGCGAGGA CGGCGTCACC ACCCTGCCGC TGGCGGGGTT TCGCCAGGCC
CACGACTACG CCTGCGGCTT CGCGGCCGCG CTGATGGTCG CGCGCTATTT CGGCGTGCCG
ACGCCGGCCA CCGAGCTGTT CGAGCGCCTG GGCACCGACC GCGAGGGCAC GCGCCAGAGC
GCCATCGTCC GCGAGCTGCG CGCCTCGGGG CTGCGCGTGA GCGTGCGCAA CCACCTCGAC
TTCGCCCGCC TGTGTCACGC CATCGAGCGC AACAAGCTGA TCCTGGTCCC GCTGGCCGAA
TCCGAGCACT GGGTGGTGCT CTACGGCTAT CGCGAGGACC CGGCCTCGGT GTTCGTCGCC
GATCCCGCGC CCGAGGCGGC CTCGTGCCAG CACCCCTGGG ATAGCTACGG TCCGCTGCTC
GGCGACGCGG CGCTGCTGGT CACGCGGCGC GGACCCGTGC GCGGCGCCCG GCAGCGGCCG
CTGGCCCTGG CCGATGGTCC CGCGCCGCCG CCGGTGCCGC GGCGTGTCGG GCGCCTGCAC
TGTCGCGTCT ACGGCTTGCC GCCGCTCGAC AGCCTGCCGA CGCGCCAGCT CGCGCTGCCC
TTCGCCTGA
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| Protein sequence | MAKTQKLVRR LRPHQAPRFL TTQPREDGVT TLPLAGFRQA HDYACGFAAA LMVARYFGVP
TPATELFERL GTDREGTRQS AIVRELRASG LRVSVRNHLD FARLCHAIER NKLILVPLAE
SEHWVVLYGY REDPASVFVA DPAPEAASCQ HPWDSYGPLL GDAALLVTRR GPVRGARQRP
LALADGPAPP PVPRRVGRLH CRVYGLPPLD SLPTRQLALP FA
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