Gene Hoch_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5216 
Symbol 
ID8547628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7171915 
End bp7172790 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content72% 
IMG OID646389891 
ProductPolypeptide-transport-associated domain protein FtsQ-type 
Protein accessionYP_003269595 
Protein GI262198386 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.78216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGCGGC GACTGCCCGA CCGCGAGGCG CTGTCCGAGG CCTGGCGCGC GGCCGTGCGC 
GGTCTGCGTC AGGGCTTGCC GCTGGTGTTC GCGGTGCTCG GCTTGGTCGT GGTGCTCACG
GCCGTGGGCG TGGGCTATCA CTTCGTGGCG AGCTCGCCGC GCTTTGCGGT GTCGCGGGTC
GAGGTGCTCG GCAATCAGCG CGTGCCGGCC TCGGCGCTGC AGTCGCGGGT GGGTCTGAGC
GCGGCGGTGC TGGGCGATGC GCCGGGGCGC AACATCTTCG CCCTGGATCT GGGACAGATG
GCCGAAACGC TGGAAGCCGA GCCCTGGATC GAGGCTGCCA CGGTGCGCCG TCGGCTGCCC
GACGCGGTGG TCATCGAGGT CGAGGAGAAT CAGCCGGTGG CGCTGGTCGA GCTCGACGGC
CTGTATCTGG TGGACGAGCG CGGCCGGGTG TTCGCGCGCG GCCAGGTCGA GCGCGGCGAC
GGCGCCGAGC TGCCGGTCAT CACCGGCATC GCGCGCGACG ACTACAACGC GGAGCCGGCG
CGCACCGAGG CGCGCATCCG CCGCGCCATC GAGGCGGTCG AGCTGTACCG CGAGCGCGAT
GGCGGGGACG GGGCCGAGGC GCGCCCGCGT CTGGGCGAGA TCCACATCGA CAACCACAGC
GGAATCACCT TTTTCACCTT CGATACGGCC ATGGCCGTGC GCATCGGCCA CGGCAGCGCC
GATGTCCTGC GCGCCCGGCT GCGTGCCTTC GACGTCGCCT GGCGCTCGCT TCCGCGCGAG
GAGCGCGCGC AGGTGGACGT CGTCTACGCC GACCTGCACG AGCGGCCCGA TCGCGTGACC
ATGCGCTTCG CCGACGCTGC CGGGATGAGC AGATAA
 
Protein sequence
MWRRLPDREA LSEAWRAAVR GLRQGLPLVF AVLGLVVVLT AVGVGYHFVA SSPRFAVSRV 
EVLGNQRVPA SALQSRVGLS AAVLGDAPGR NIFALDLGQM AETLEAEPWI EAATVRRRLP
DAVVIEVEEN QPVALVELDG LYLVDERGRV FARGQVERGD GAELPVITGI ARDDYNAEPA
RTEARIRRAI EAVELYRERD GGDGAEARPR LGEIHIDNHS GITFFTFDTA MAVRIGHGSA
DVLRARLRAF DVAWRSLPRE ERAQVDVVYA DLHERPDRVT MRFADAAGMS R