| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5210 |
|---|
| Symbol | |
|---|
| ID | 8547622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 7164396 |
|---|
| End bp | 7165421 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646389885 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003269589 |
|---|
| Protein GI | 262198380 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCT ACCAGACCAT CTCGCAGCAG CTCGAGGCCG AGCCCAAGCG CTGGCTGATC
ACCGGCGTGG CCGGCTTCAT CGGCTCGGCG CTGCTCGAGC GCTTGCTCGG GCTGGGCCAG
GACGTCGTCG GCATCGACAA CTTCGCCACC GGCCACCAGC ACAACATCGA TGACGTGCTG
TCGCAGTTCC CGGACGCGCG CTTCACCTTC GTGGAGGGCA GCATCACCGA CGGCGACGCC
TGCAAGCGCG CGTGTGACGG CGTCGATTAC GTGCTGCACC AGGCCGCGCT GGGCTCGGTG
CCGCGCTCCA TCAACGAGCC GCGGGCGTCG CATCACGCCA ACGTCAACGG CTTCCTCGAG
CTGATGCTGT CGGCGCGCGA CGCCGGCGTC AAGCGCGCGG TCTACGCCAG CTCGAGCTCG
GTGTACGGCG ACCATCCCGG GCTGCCCAAA GTCGAGGAGC GCATCGGCCG CCAGCTCTCG
CCCTACGCCA TCACCAAGCG CGTGGACGAG CTCTACGCCG GCGTCATCCA GGACTGCTAC
GGCACCGAGA TCATCGGCCT GCGCTACTTC AACGTGTTCG GCCGGCGCCA GGATCCGCTG
GGCGCGTACG CGGCCGTGAT CCCGCGCTGG GTGGACGCGC TGCTAGGCGG CCGCGGCTGC
CAGATCTTCG GCGACGGCAG CAACAGCCGC GACTTCTGCT ACGTGGACAA CGCGGTACAG
GCCAACATCC TGGCCGCCAC CACCGGCGGC CCCGAGGTCA CCAACACCGT GTACAACGTC
GGCTGCGGCG GGCGCACCAC GCTGGTCGAG CTGTTCGAGT ACATCCGCGA CGGCCTGGCC
GAGATGCATC CCGAAGTCGC CGACGCGCAG CCCGAATTCA CCGAGCCGCG CGCCGGGGAC
GTGCTGCACT CGCAGGCCAA TATCGACAAG ATCCGCGAGA AGCTCGGCTA CGAGCACACG
CACGAGATTC GCGAGGGACT GCGCGAGACC GTGCACTGGT TCGCCGAGCG CGCGGGCAAG
TCCTGA
|
|---|
| Protein sequence | MTRYQTISQQ LEAEPKRWLI TGVAGFIGSA LLERLLGLGQ DVVGIDNFAT GHQHNIDDVL
SQFPDARFTF VEGSITDGDA CKRACDGVDY VLHQAALGSV PRSINEPRAS HHANVNGFLE
LMLSARDAGV KRAVYASSSS VYGDHPGLPK VEERIGRQLS PYAITKRVDE LYAGVIQDCY
GTEIIGLRYF NVFGRRQDPL GAYAAVIPRW VDALLGGRGC QIFGDGSNSR DFCYVDNAVQ
ANILAATTGG PEVTNTVYNV GCGGRTTLVE LFEYIRDGLA EMHPEVADAQ PEFTEPRAGD
VLHSQANIDK IREKLGYEHT HEIREGLRET VHWFAERAGK S
|
|---|
| |