Gene Hoch_5180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5180 
Symbol 
ID8547592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7131776 
End bp7133305 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content70% 
IMG OID646389857 
Productband 7 protein 
Protein accessionYP_003269561 
Protein GI262198352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAC CACGCATCGC GCTCGTCCCC GACCCCGATT CCCGTCAGCT CGCGTCCGCG 
AGCCCCAAAC CGCCCGACCA TGTCGCGCGC ATCAACGACG GCTGGCGTCG CGGACGCCCG
GTCGAAGACC CATCCAAGAC CAAGCGCTGG GGGTTCATTA CCGCCAAGCC GTCCGAATAC
CTCATCCACA TGCGCCGCGG CCGCATCCTG CGCAAGACCA CGGGCCAGGG CGCGAGCTGC
TTCAAGTGGC CCTGGGACTC GATCGCCATC GTGCCCACGA CCATCAACCG GCTGCAGTTC
ACGGCCGATC AGGTCACGCT CGAGAAGGTC GGCATCCAGG TCACCGGTCT GGCCGTGTAC
CGCATCGTCG AGCCCGAGCT GACCTTCCGC ATGCTCAACT TCTCGTTCTC CGAGCGCGCC
AGCGAGAAGC TCAGCGACAT CCTGCGCGAG ATGTTCGCCG GCGCCACCCG TCGGCACATC
GCCAACCTCT CGGTCGAAGA CGCCATGACC CGGCGCAAGG AGGCCATCGC CAGCGAGCTG
ATGCGCGAGT TGGCCCCGGT CATGAGCGGC AACGGCGAGG CCCACGACAG CACCACCCAG
GGCTGGGGCG TGGTCCTCGA CACCGTCGAA GTGCAGTACG TGCGCGTCCT CTCCGAGCGC
GTATTCAGCG ACATGCAGGC CGAGTATCGC AGCCGCCTGG CCATGAAAGC GCGCCAGGCC
GAGCTCAGCA GCGCCCAGGA GATCGCCGCC CGCGAGGCCG CCAGCGCGCG CGCCATCGAG
GAGGCCAAGC TGTCGGCCGA TACCGAGACC CGCGAGCTGC GCGCGCTGTC CGAGAGCCGC
GCCACCCAGA TCGAATTGGC CGAGCGCAAC AAGCGCGAAG CCCTCGAGGC GCAGAGTGAA
GCCGAGCGCA TCGCGCGTCA GCGCGCCCGC CAGGTCGCCG AGCTTCAGGC CCAGGCCGAG
ATCGCCAGCG AGCGCTCCTC GCTCGAGGAG CGGGCGCAGC TCGACGAGCT GTCGCGCGAG
CAGAAGCTGG CCGAGGCCGA GCGCCAGCTC ATCGAGACCC GGCACGAGAA CACGCTGCGC
GAGACCCAGC TCGAGGCCGA GCGCGAGCAA CAGGAACAGG AACATCAGGC CGCGCTGCGC
GAGATCGAGA GCCAGAGCCA GGACGCGCTC GCGCGCCGCC GCATCGCGGC CGCCCAGTAC
CAGGGCGAGA GCGAGGCGCA CCTCGAAGCG CTGCGCAAAC AGGTCGAGAA CACCGTGTCC
GAAGACCGCA TCCGCATGGC CCTGGTCGAG CGCTCGCTGC CGGCCGTGGC CCAGGCCTTT
GCCCAGCAGT TCGGCGAGGC CCGCTTCACC CAGATCGGCG GCGCCGGCCT CGACCCCAGC
GCCATGGTCG GCAACGCCCT CACCCAGGTG CTCGACATCG CCCGCGCGCT TGGCCTGCGC
CCCGAGGCCC GCACAGGCGC GGCCTCGCCC GGTGCAGCGG CCGACGCGGC GACTCGCGTC
GTGAACGACG TCGAGCGCGA CGCGCCCTAG
 
Protein sequence
MAAPRIALVP DPDSRQLASA SPKPPDHVAR INDGWRRGRP VEDPSKTKRW GFITAKPSEY 
LIHMRRGRIL RKTTGQGASC FKWPWDSIAI VPTTINRLQF TADQVTLEKV GIQVTGLAVY
RIVEPELTFR MLNFSFSERA SEKLSDILRE MFAGATRRHI ANLSVEDAMT RRKEAIASEL
MRELAPVMSG NGEAHDSTTQ GWGVVLDTVE VQYVRVLSER VFSDMQAEYR SRLAMKARQA
ELSSAQEIAA REAASARAIE EAKLSADTET RELRALSESR ATQIELAERN KREALEAQSE
AERIARQRAR QVAELQAQAE IASERSSLEE RAQLDELSRE QKLAEAERQL IETRHENTLR
ETQLEAEREQ QEQEHQAALR EIESQSQDAL ARRRIAAAQY QGESEAHLEA LRKQVENTVS
EDRIRMALVE RSLPAVAQAF AQQFGEARFT QIGGAGLDPS AMVGNALTQV LDIARALGLR
PEARTGAASP GAAADAATRV VNDVERDAP