Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5165 |
Symbol | |
ID | 8547577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7114988 |
End bp | 7116769 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646389842 |
Product | response regulator receiver sensor hybrid histidine kinase |
Protein accession | YP_003269546 |
Protein GI | 262198337 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCCAC GAGCGCAGAC TGCGCGACGC ATTCTGCTCG TCGACGACAA TCCGTCGATC CACGACGATT TTCGCAAGAT CCTCGACGAG GATCTCGCGC CCGCGCTCGA TGCGCTGGCC GATATCCTGC TCGGCGAATC GGTGCCCGGC GGGCAGCGCC AGCGCTTCGT GCTCGATTCC GCGTTTCAGG GCGACGAGGC TCTGCGCCTG GTCGAGAAGG CCAAGGACGG GGAGCACCCC TACGCGGTGG CGTTCATCGA CCTGCGCATG CCGCCGGGCT GGGACGGGCT CGAGACCCTG CTGCGCATCT GGGAGGTGGA TTCGCGCATC GAGGCGGTGC TGTGCACGGC GTACGCCGAC TACTCGTGGG AGCAGTTCCT CGAGCGCGTG GGCGACAGCG ACCAGCTCTT GATCCTCAAG AAGCCCTTCG ACATCGCCGA GGTCCGCCAG CTCGTGCACG CGCTCACGGC CAAGTGGCAG CTCGCGCGCG ACAACGAGCG CCGGCTCGAG CGGCTGGAGA TCAACCTGCT CGGGCGCACC CGCGAGCTGG CCTCGGCCAA CGAGGCCTTG CAGCGCGAGA TGAACGAGCG CGAGCGCACC GAGCGGGCCC TGCGCAAGGC CCAGCGGCTC GAGGCTCTGG GTCGGCTGGC GACCGGCATC GGTCACGAGA TCAACGACCC TCTGACCTTC TTGACCACCG GCATCGAGTC GATCAGCGCC GAGTTTGGCG ACATTCGCCG CTATCTGCCC GGGGACGTGC ACGCCGAGCT GGCCGAGCTG CTCGAGGCCG CGTCCATCGG CGTCGACCGC ATCTCGCAGA TCGTGCGCAG CATCCAGCTC TTCGGCGAGA AGGACGCGCC CGACAGCACC TCGCTCGAGA TCGTCGACCT GGTCGCGGTG CTCAAGCTGT CGGTGCGCAT GGTGACGCGC TCGCTCGACA CCGACATCGA GTTTTGTACC GAGCTGGACG AGGTGCCCGC GGTGCGCGGC AGGCGGGTGC CGCTGGAGCA GGTGTTCGTC AATCTGCTCA ACAACGCGGT GCAGGCGCTG AATTCGGACG AGCGGGCGGG AGTCCAGCCG CGCATCGTCG TGCGCTGCAG CAGCGTGGCC TCGGGCGAGC AGGTGCGGGT GGCCATCGCC GACAACGGCA TCGGCATCCC GGCCGAGCAC CTCGAGCAGA TCTTCGACCC CTTCTTCACG ACCAAGCCGG TCAATCAGGG CACCGGCCTG GGCCTGTCGA TCTGCCACAG CATCGTGCGC GAGCTGGGCG GCGAGATCGA CGTGCAGAGC ACCGAGGACG TGGGCACCAC GGTCAACGTG GTGCTGCCGG TGGCGCAGCG GGACGCGGCC GACGATACCA CCCGGGACGA GCCGGCCCTG GACGCCAGCC CGGAGGTGAC GCCGCGCCGC GGCCGCATCC TGGTGGTGGA CGACGAGCCG CTGATTCTGC GCATGATGAT GCACGCCCTG CGCGAGCACG ACGTGGTCGC GGTGACCAGC GCGCGCGACG CGCTCGAGCG GCTCCGCGGT GGCCACTTCG ACATGGTGCT GTGCGACCTG ATGATGCCGG GCATGACCGG CATGGCGCTG TACACCGAGC TGTGCGCGCA GCAGCCGAGG CTGGCCGATC GCATGGCGTT CATGACCGGC GGCACGCTGC TGCCCGAGGT GCAGCAGTTC CTCGCGGACA CGCCGATCGA GTGCCTGGAG AAGCCGATCC GCATCCAGCG GCTGCGCAGC TTCGTGGCCG AGCGCGTGAA CCGCAGCCTG GCAGCCTGTT GA
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Protein sequence | MRPRAQTARR ILLVDDNPSI HDDFRKILDE DLAPALDALA DILLGESVPG GQRQRFVLDS AFQGDEALRL VEKAKDGEHP YAVAFIDLRM PPGWDGLETL LRIWEVDSRI EAVLCTAYAD YSWEQFLERV GDSDQLLILK KPFDIAEVRQ LVHALTAKWQ LARDNERRLE RLEINLLGRT RELASANEAL QREMNERERT ERALRKAQRL EALGRLATGI GHEINDPLTF LTTGIESISA EFGDIRRYLP GDVHAELAEL LEAASIGVDR ISQIVRSIQL FGEKDAPDST SLEIVDLVAV LKLSVRMVTR SLDTDIEFCT ELDEVPAVRG RRVPLEQVFV NLLNNAVQAL NSDERAGVQP RIVVRCSSVA SGEQVRVAIA DNGIGIPAEH LEQIFDPFFT TKPVNQGTGL GLSICHSIVR ELGGEIDVQS TEDVGTTVNV VLPVAQRDAA DDTTRDEPAL DASPEVTPRR GRILVVDDEP LILRMMMHAL REHDVVAVTS ARDALERLRG GHFDMVLCDL MMPGMTGMAL YTELCAQQPR LADRMAFMTG GTLLPEVQQF LADTPIECLE KPIRIQRLRS FVAERVNRSL AAC
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