| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5148 |
|---|
| Symbol | |
|---|
| ID | 8547559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7089032 |
|---|
| End bp | 7089913 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646389824 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_003269529 |
|---|
| Protein GI | 262198320 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTT TGGTAGGAAA CGATACCCGC CTCGTGGTTC AGGGCATGAC CGGCTCGGCC
GGCGCCTTCC ACACGCGGCA AGCGATGGAA TACGGCACCA ATGTGGTCGC CGGCGTGACC
CCGGGGAAGA AGGGCGCCAA GGTCGAGGGC CTCGAGAAGG TGCCCGTGTT CGACTCCTGT
GAGGAGGCCG TGCGCGAGGC CGGCGCCAAC GCCAGCGTGG TCTACGTGCC GCCGCCCTTC
GCCGCCGACG CCATCATGGA AGCCGCCGCT GCCGGCATCC CGCTGATCAT CGCCATCACC
GAGGGCATCC CGGCGCATGA CATGATCCGG GTGAAGACCA TGCTCGCCGC GGATCACCCG
AACACCGTGC TCATCGGGCC CAACTGCCCC GGCATCATCA CGCCCGAGGA ATGCAAGATC
GGCATCATGC CCGGCTACAT TCACAAGAAG GGCAACGTCG GCGTGGTCTC GCGCTCGGGC
ACGCTCACCT ACGAGGTCGT GCACCAGCTC TCGGCCCTCG GCCTGGGTCA GTCCACGGCC
ATCGGCATCG GCGGCGACCC GGTCAAGGGG CTCGACTTCA TCGAGTGCGT CAAGCTGTTC
AATGAGGACC CCGAGACCGA GGCGATCTTC CTCATCGGGG AAATCGGCGG CTCGTCCGAA
GAAGACGCCG CCGCGTACAT CAAAGAGCAC GTCAAGAAGC CGGTGGCCGC GTTCATCGCC
GGTCAGACCG CGCCTCCCGG AAAGCGCATG GGCCACGCCG GCGCCATCAT CTCCGGCGGC
AAGGGCACGG CTTCCGCCAA GATCGAGGCC CTCCAAGCGG CCAACATCGC CGTCTCGCCG
ACCCCGGCCG AGATGGGCAC CACCCTGCAG AAGATCCTCT GA
|
|---|
| Protein sequence | MSVLVGNDTR LVVQGMTGSA GAFHTRQAME YGTNVVAGVT PGKKGAKVEG LEKVPVFDSC
EEAVREAGAN ASVVYVPPPF AADAIMEAAA AGIPLIIAIT EGIPAHDMIR VKTMLAADHP
NTVLIGPNCP GIITPEECKI GIMPGYIHKK GNVGVVSRSG TLTYEVVHQL SALGLGQSTA
IGIGGDPVKG LDFIECVKLF NEDPETEAIF LIGEIGGSSE EDAAAYIKEH VKKPVAAFIA
GQTAPPGKRM GHAGAIISGG KGTASAKIEA LQAANIAVSP TPAEMGTTLQ KIL
|
|---|
| |