Gene Hoch_5124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5124 
Symbol 
ID8547535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7063177 
End bp7063602 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content76% 
IMG OID646389800 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003269505 
Protein GI262198296 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCC CCGACGACAT CCTCGGCCGC CGTCGCCACG CGCCGCAGAT CCAGCTCTCG 
GCGCTGATCG ACGTGCTGTT CATCGTGTTC GTGTTCGTGA TCCTGGTCGC CCGCTTCCAG
GACCCGGCCC TGGGCGCGCT CGAGGTCGCG CTGCCGCGCT CGGCCGCGCC CGCCGAACTC
GACGACAGCT CGGCCGCGGT GCTCGAGGTC GCCCGCGACG GCGCCGTGCA GCTCGACGGC
GAGGCCGTAC CCGCCCGCCA GCTCGACGCC GCCCTGCGCC GCGCTCGCGG GCGCAGCGAT
GCCCTGGTCC TGGCCGCCGA TGGCGAGCTG CCGCTCGAGC GCGCCACCGA GCTGATCGCG
GCCGCTACCC GCGCCGGCTT CGCCAGCGTG TCCATCGCCA CGCGCAGCCG GCAGGCGCCG
CAGTGA
 
Protein sequence
MSGPDDILGR RRHAPQIQLS ALIDVLFIVF VFVILVARFQ DPALGALEVA LPRSAAPAEL 
DDSSAAVLEV ARDGAVQLDG EAVPARQLDA ALRRARGRSD ALVLAADGEL PLERATELIA
AATRAGFASV SIATRSRQAP Q