Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5124 |
Symbol | |
ID | 8547535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7063177 |
End bp | 7063602 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 646389800 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_003269505 |
Protein GI | 262198296 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCC CCGACGACAT CCTCGGCCGC CGTCGCCACG CGCCGCAGAT CCAGCTCTCG GCGCTGATCG ACGTGCTGTT CATCGTGTTC GTGTTCGTGA TCCTGGTCGC CCGCTTCCAG GACCCGGCCC TGGGCGCGCT CGAGGTCGCG CTGCCGCGCT CGGCCGCGCC CGCCGAACTC GACGACAGCT CGGCCGCGGT GCTCGAGGTC GCCCGCGACG GCGCCGTGCA GCTCGACGGC GAGGCCGTAC CCGCCCGCCA GCTCGACGCC GCCCTGCGCC GCGCTCGCGG GCGCAGCGAT GCCCTGGTCC TGGCCGCCGA TGGCGAGCTG CCGCTCGAGC GCGCCACCGA GCTGATCGCG GCCGCTACCC GCGCCGGCTT CGCCAGCGTG TCCATCGCCA CGCGCAGCCG GCAGGCGCCG CAGTGA
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Protein sequence | MSGPDDILGR RRHAPQIQLS ALIDVLFIVF VFVILVARFQ DPALGALEVA LPRSAAPAEL DDSSAAVLEV ARDGAVQLDG EAVPARQLDA ALRRARGRSD ALVLAADGEL PLERATELIA AATRAGFASV SIATRSRQAP Q
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