Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5118 |
Symbol | |
ID | 8547529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7052725 |
End bp | 7055238 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646389794 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_003269499 |
Protein GI | 262198290 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.657918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCCA CGAATCTCTT CATGCCGCAC GGCCACTGTT ATCTGTGGCA GCCCGGACTG CTGTTCGCCC AGGTGGTGAG CAATGCGCTG ATCGGACTGT CCTACGTGGC CATCTCGCTC ACCCTGCTGT ACCTGGTGAG ACGCGGCGAT TATCTGCCTT TCAAAGGCAT GGCCCTGGCT TTCGGCACGT TCATCATCTC GTGCGGCCTC ACCCATTTCA TGGACATCTA CGTCATCTGG TACCCGTCGT ACTGGCTCGA CAGCGCGGTC CGCGGGGTGA CCGCCATCGC CTCGGTGGCC ACCGCGCTGA TCCTGCCATC GCTGGTGCCG CGCGCGGTGG CCCTGGCCCG CGGCGCGCGC ATGGCGCGGG CGCGCGGCAT CGAGCTCGAG GCCGCGGTCG ACGACCTGGC CCAGCTCTAC ACCAAGACCC GCGAGCTCGA GCAGCTCAAG ACCGAGTTCT TCGCCAACGT CAGCCACGAC CTGCGCACGC CGCTCACCCT GATCATGGGG CCGCTGCAGA AGCTGGCGCA GGCCGAGAAC CTGCTCGCCG GCCAGCGCCA GGACATCGAG GTGGCGCTGC GCTCGGCCAA CACCTTGCTC GGACGGATGA ACGATATCCT CGACGTCGCC CGGCTCGACG CCGGCGAGCT GTCGCCCAGC TACGCCTCGT GCGAGCTCGA CGCGCTGGTG CGCGAGGCCG CCAGTCACTT CGACGTCATG GCCGGCGAGC GCGAGATCGA CCTCAGCATC GAGGCCGAGG AGACCCTGGT GGCCGAGCTC GATCCCTCGA GCATCCAGCG GGTGCTGCTC AACCTCATGG CCAACGCCTT CGAGCACACC CCGCGCGGCG GCCGCATCCG CTGCTCGCTC GAGCGCATCA GCGGCGAGCG CGTGCGCATC GAGGTGGCCG ACAGCGGCCC CGGGGTGCCG CCCGACAAGC GCAGCCAGAT CTTTCAGCGC TTCCAGCGCG GCGAGGCCCA GGGCGAGCGC CGCTTCGACA GCAGCAGCGG CCTGGGGCTG GCCATCTGCA AGGACTTCGT GCTGCTGCAC CGCGGCCGCA TCGTGGTCCT CGAGGCGCCC GAGGGCGGGG CGCTGTTCCG CATCGAGTTG CCGCGGCGCG CGCCCGAGGG CGCCGAGGTC GCCGCGCGCG TCGAGCCACC GACGCAATCC CAGAGCGGCG CCGCCGCGCT CTCGCGGCAG GCGCCCGAAC CCGAGCTCGA GCCGTCGAGC GGGGAGGGGA ACGCCGTGAA CAAACCCGTG GTATTGGTCA TCGAGGACAA CGTCGATATG AACCGTTTCG TGGTCGAGAC CCTGGCCGAG GGCTACCACA CCGTGAGCGC GCTCGACGGC CGCGAAGGCC TCGATCTGGC GCTCAACCAC TCGCCCACGC CCTCGCTGAT CATCAGCGAC TTGATGATGC CCGAGATGAA CGGCGAGCGC CTGATCACCG AGCTGCGCAA CCACGCCCAG CTCGACGATG TGCCGGTGCT GTTTCTGTCC GCACGCGACG AGGAGGCGCT GCGCACGCGA CTTCTGCGCT CCGGCGCGCA GGACTATCTC GCCAAGCCCT TCTCGCCCGG CGAGCTGCGC GCGCGCGCCG ACAACCTGGT GCGGGTCAAG CGCACCTGCG AGGTCTTGCA GCGCGCGCTC GACTCGCAGT CGCGCGATCT CGAACAGCTC GCCCGCGAGC TGGCGCAGCG CAAGCGCGCC CTGCAGGACG CCCTCGAGTC GACGCGCGTG GCCCGCGAGC AGGCCGAGCA GGCCAGCCAG CTCAAGTCCG ACTTCCTCGG CATGGTCACC CACGAGCTGC GCTCGCCGCT GGCCAGCCTG GCGCTGCAGC TCGAGCGCCT CGACATGATG GACGCCAACC CCGCGCCCGC GGTGCACACC CTGCGCCAGC GCATGAACAG CTCGATCGGA CGACTGTCCT CACTCATCGA GTCGCTGCTC GAGTACGTGC GCGTGCAGCG CGGTCACCTG GAGGTGCGGC CCGAGCGCTT CGACCTGCAC CTGCTGGTGA CCGATCTGGT CGACGACCTC AAGATCCAGG CCGAGGACAA ACGCCTGGAG CTGAGCCTGC GCTGTGAGGG CCGCCTGCCG CAACTGCTGA GCGACATGCG CCTGGTGCGC CTGGCGGTGC TCAACCTGGT CGGCAACGCC ATCAAGTTCA CCGATGAGGG CAGCATCGCG GTCGCCCTCT CGTACGCCGA CGAGCGCCAC CTGATCGCGG TTTCGGACAC CGGGCCGGGA ATCCCGGATG AGGCCCAACA CCGCATCTTT CAACCCTTCG AGCAGATGGT CACCACGCGC AAGAAGCACC TACCCGGCGT CGGCCTGGGG CTGGCCCTGG TGCGCGAGAT GGTCACCAGC GTCAACGGCA CCATCGCGCT CGAGTCCAAG GTCGGCGTGG GCAGCACCTT CCGCATCGCG CTGCCGCCCT TCGTCGTCCC CGAGGCCGAG CCCGGCGCCG ACGACCCCGA GCCCGGCGCC GACGATACCG ATAGTCGCGC CTGA
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Protein sequence | MFSTNLFMPH GHCYLWQPGL LFAQVVSNAL IGLSYVAISL TLLYLVRRGD YLPFKGMALA FGTFIISCGL THFMDIYVIW YPSYWLDSAV RGVTAIASVA TALILPSLVP RAVALARGAR MARARGIELE AAVDDLAQLY TKTRELEQLK TEFFANVSHD LRTPLTLIMG PLQKLAQAEN LLAGQRQDIE VALRSANTLL GRMNDILDVA RLDAGELSPS YASCELDALV REAASHFDVM AGEREIDLSI EAEETLVAEL DPSSIQRVLL NLMANAFEHT PRGGRIRCSL ERISGERVRI EVADSGPGVP PDKRSQIFQR FQRGEAQGER RFDSSSGLGL AICKDFVLLH RGRIVVLEAP EGGALFRIEL PRRAPEGAEV AARVEPPTQS QSGAAALSRQ APEPELEPSS GEGNAVNKPV VLVIEDNVDM NRFVVETLAE GYHTVSALDG REGLDLALNH SPTPSLIISD LMMPEMNGER LITELRNHAQ LDDVPVLFLS ARDEEALRTR LLRSGAQDYL AKPFSPGELR ARADNLVRVK RTCEVLQRAL DSQSRDLEQL ARELAQRKRA LQDALESTRV AREQAEQASQ LKSDFLGMVT HELRSPLASL ALQLERLDMM DANPAPAVHT LRQRMNSSIG RLSSLIESLL EYVRVQRGHL EVRPERFDLH LLVTDLVDDL KIQAEDKRLE LSLRCEGRLP QLLSDMRLVR LAVLNLVGNA IKFTDEGSIA VALSYADERH LIAVSDTGPG IPDEAQHRIF QPFEQMVTTR KKHLPGVGLG LALVREMVTS VNGTIALESK VGVGSTFRIA LPPFVVPEAE PGADDPEPGA DDTDSRA
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