Gene Hoch_5115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5115 
Symbol 
ID8547526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7048290 
End bp7049141 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content74% 
IMG OID646389791 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003269496 
Protein GI262198287 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGTCC CCCATCACAC CATCGTCACG GCCGAGGGCC GCACGCCCGA ACAGCTCATG 
CTGGTGCTGC ACGGCATCTA CGGCAGCGGC GCCAACTGGC GCAGCTTCGC CAGCAAACTG
TGCGAGCGCG ACCCGGCGTG GGGCTTTGCG CTGGTCGATC TGCGCATGCA CGGGCGCTCG
CAGGCGGCGC CGGCGCCGCA CACGGTGACC GCGGCGGCCG GCGATCTGGT GGCCTTGTGC
GACCAGCTCA AGCTGCAGAG CGCGCCGGTG CGCGCGGTCT GCGGACACTC CTTCGGCGGC
AAGGTGGCGC TGGCCTTTCG CGCCGCCGTG GCCGCGGACG CCAGCGCCGA GCCGCTGCAG
CAGACCTGGG TGCTCGATGC GCCCATCCGG CCCACACCCG ACGCGCTCGC GGCCGACAAC
GCGGTCACCA AGGTGCTGCG CATGCTCGCG ACCCTGCCCG CGCGCTTCGA CAGCCGCCGC
GCCTTTGTCG AGCACGCGCG CGCCCAGGGT CTGCCCGGCG CCATCGGCCA GTGGCTGGCC
ATGAACCTCG AGGAAGTCGA CGACGACGAC GGCGGCGGCC TGCGCTCGCG CCTCGACGCC
GGAGCCATGC GCCTGCTGCT CGAGGATTTC CACGGCTTCG ACGCCTGGCC GGCGCTGCGT
GAGGGCCCGG GCGAGGTGCA CGTGGTCGTG GCCGGACGCT CGCCCGCGGT CGGCGAGGAC
GATCGCGCCG AGCTCGAAGC CCTGGCCGCG TCGTCGCCCC AGGTCCACGT GCATCACCTC
GCCGAGGCCG GCCACTGGCT GCACGTCGAC GCCGCGCAGG CGCTCCTCGA CCTCGTCGCC
GCCGCGCTGT GA
 
Protein sequence
MFVPHHTIVT AEGRTPEQLM LVLHGIYGSG ANWRSFASKL CERDPAWGFA LVDLRMHGRS 
QAAPAPHTVT AAAGDLVALC DQLKLQSAPV RAVCGHSFGG KVALAFRAAV AADASAEPLQ
QTWVLDAPIR PTPDALAADN AVTKVLRMLA TLPARFDSRR AFVEHARAQG LPGAIGQWLA
MNLEEVDDDD GGGLRSRLDA GAMRLLLEDF HGFDAWPALR EGPGEVHVVV AGRSPAVGED
DRAELEALAA SSPQVHVHHL AEAGHWLHVD AAQALLDLVA AAL