| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5090 |
|---|
| Symbol | |
|---|
| ID | 8547501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7016075 |
|---|
| End bp | 7016545 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646389766 |
|---|
| Product | DifB protein |
|---|
| Protein accession | YP_003269471 |
|---|
| Protein GI | 262198262 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2315] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGC GCGCGCTGCG CGAGATCGCG CTGGCCCTGC CCGAGGCCTA CGAAGACCAT
CCCTGGGGCG AATCCGCCTT CAAGGTGCGC AAGAAGGTCT TCCTGTTCAT GCATCTCGAT
GGCGATGAGC TGTCGCTCTC GCTCAAGCTG CCGCTCTCGG GCGAGGTGGC GCTCACGCTC
TCGTTCACCT CGCCCACCGG CTACGGCCTG GGCAAGAGCG GCTGGGTGAG CGCGCGCTTC
GCCGCCGAGG ACGGCCCGCC CGTGGCCATG CTGGAGGCGT GGATCGAGGA GAGCTACCGC
GCGGTCGCGC CCAAGAAGCT GGCCGCGCAG CTCATTCAGG ACGGCGAGAC CGCGAGCGTG
AAGCCAGCGG CAGCCAAGCA GCCGGCCGCC AGAAAGGCAG CCACGAAAAA GGCTGCCAAG
AAGCCGGCCA CGAAAAAGGC CGCCGCGAAA ACCGCCGCAA AGACGAAGTA G
|
|---|
| Protein sequence | MIARALREIA LALPEAYEDH PWGESAFKVR KKVFLFMHLD GDELSLSLKL PLSGEVALTL
SFTSPTGYGL GKSGWVSARF AAEDGPPVAM LEAWIEESYR AVAPKKLAAQ LIQDGETASV
KPAAAKQPAA RKAATKKAAK KPATKKAAAK TAAKTK
|
|---|
| |