| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5086 |
|---|
| Symbol | |
|---|
| ID | 8547497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7011614 |
|---|
| End bp | 7013215 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646389762 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003269467 |
|---|
| Protein GI | 262198258 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG TCAAACTCAA ACCCGCGGCG AAGATCCTCA TCGTCATCAT CGTCCTGGCG
GCCGGTTTCG CGCTGTACAA CTTCGTGCTC AAGGACATGC TGGCCAAAGG CGGCGGCGGC
GGCGACGGCG GCGGCGACGA AGTGGCCAAC GGCGACGGCG ACACCGGCAA CACCGGCAAC
ACCGGCAAGA AGGACGTGTA CCGCGTGGCG CTGTCCGAGT GGCCCGGGCA CATGCCCATG
GTGATCGGCA ACGGCGGCCT CAAGACCCAG GCCGGCTCGG CCGCCGACCG CGAGGGCATC
AAGCTCGAGA TCGTGTTCAT CGAGGACCCG ATCAAGAAGA ACGCGGCGCT GCAGAACGGC
TCGGTGGACT TCGTCTGGCA GGTGGTCGAC GAGATGCCCA TCAACATGGG CGGCTACAAG
CAGTCGGGCG TCGAGCCGCG CGCCTTCCTG CAGCTCGACT GGTCGCGCGG CGGCGACGCC
TGCGTGGCCT CCAAGGAGAT CGAGACGGTC GAGGACATCC TCGGCCACAA GTCGGCGATG
ATGATGTTCT CGCCCGATCA CACGGTGTTC GAGTTCATGA TCAACAACTC GCGGCTCACG
CCCGATCAGA TCGCCCAGGT GCGCCAGGAC ACCAGCTTCT CCATGGACGA CTTCACCTAC
GGCCGCGTGC TCTTCGTGCA GAACAAGGTC GATGTCGCCT GTCTGTGGGA GCCCGACGTC
ACCCTGGCGC TCGAGGGTCG CCCCGGCGCC CATCGCCTGT TCTCCACGGC TGACGCCACC
GAGCTGATCG CCGACGTGCT GCTGACCCGC CAGGACACCC TGGCCAGCAA TCAAGACGTC
GCCGAGAAGG TGGCCAAGGT GTGGTTCGCC GGCGTCGAGC AGGCCGAGAG CGACCGCCAG
GCCGCGGCCC GCTTGATCGC GCAGGTGGTG CCGCGCTTCC GCGACGAGCT GGGCGTGGAC
GGCACCCTGG GCGCCTTCGA GTGGGTGAAG TGGACCAATC TGTCCGACAA CGCGCGCTTC
TTCGGCGTCT CCGGCGGCCA GGTGGCCTTC GACCGGGTGT ACAACCAAGC CGACGGCGTG
TGGACCCAGT ATCCCAAGGC CGAGATCACC GACCGCTTCG CGCCCAGCGC GCTGCGCAAC
GACAAGATCG TCGCCGAGCT GTGGGAGAAC CGCCCCGACG ACGAGCCGGT CGCGGCCACC
ACCCGGCCCG AGCCCGAGTA CAAGCCCGAG GTCGCCGACA CCGGCCGCGC GGTGTTCACC
AAGCCGGTGA CCATCAACTT CGACACCGGC CAGAGCGCGC TCGACCCCGA GTCGATGCAC
CTGCTCAACA CCCAGGTGCT GCCGCAGCTC GAGATGGCCG GCGGCATGTA CGTGCGCATC
GAGGGCAACA CCGACAACGT CGGCGACAAG CGCGGCAACC AGGCGCTGAG CGAGGCCCGC
GCGCAGTCGG TTCTCGACTA CCTGGTCCAA AAAGGTATCA ACGCCAAGCG CCTGTCGGCC
AGGGGCAACG GCTCCGACAG CCCGGTGGCC AGCAACAAGA CCGCGGACGG GCGGGCGGCC
AACCGCCGCA CCGACATCGT CTTCATCAGC GGCCAGGAGT AG
|
|---|
| Protein sequence | MAKVKLKPAA KILIVIIVLA AGFALYNFVL KDMLAKGGGG GDGGGDEVAN GDGDTGNTGN
TGKKDVYRVA LSEWPGHMPM VIGNGGLKTQ AGSAADREGI KLEIVFIEDP IKKNAALQNG
SVDFVWQVVD EMPINMGGYK QSGVEPRAFL QLDWSRGGDA CVASKEIETV EDILGHKSAM
MMFSPDHTVF EFMINNSRLT PDQIAQVRQD TSFSMDDFTY GRVLFVQNKV DVACLWEPDV
TLALEGRPGA HRLFSTADAT ELIADVLLTR QDTLASNQDV AEKVAKVWFA GVEQAESDRQ
AAARLIAQVV PRFRDELGVD GTLGAFEWVK WTNLSDNARF FGVSGGQVAF DRVYNQADGV
WTQYPKAEIT DRFAPSALRN DKIVAELWEN RPDDEPVAAT TRPEPEYKPE VADTGRAVFT
KPVTINFDTG QSALDPESMH LLNTQVLPQL EMAGGMYVRI EGNTDNVGDK RGNQALSEAR
AQSVLDYLVQ KGINAKRLSA RGNGSDSPVA SNKTADGRAA NRRTDIVFIS GQE
|
|---|
| |