| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5080 |
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| Symbol | |
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| ID | 8547491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7003466 |
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| End bp | 7005499 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646389756 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003269461 |
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| Protein GI | 262198252 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCATCG AGAGCTTGAT CGAATCCAAG CTACTCGCTG TAGTGACCGT TCAGGTGGCG
TCGGGGCAAC TTGGACGCGT GCAGCAGGCG AGCGTGGCAG CGCGCGCGCT GCTCGGCTAT
GAGCGCGAGG CGTCCGAACT CACGGGCGAC GACGCGCTGG AATGGCGAGA GCTGGTGGCG
GACGAATCCC CGGGGCAGTC TGCCGGCGTC GCGCTGCCCA CCGGCCAAGC CGTCGAACTC
GAACTGTGCC GCCGCGACGG CGAGCGCATC CCGGTGTGTG TCGAGCGCAT CGACGCCGCA
GACGAGCTGT GCCTGCTCCT GCTCCATCCC CGCCACGGCC ACCAGCCACC GACCCGGCCC
CCCGCTCGCG CCGGTGGGTT GCAGGATGCT CCGGCACAGT CATCCGGGGC ATTCGATGTT
TCGTCCAACA AACCAGCTTT TGCGTCGGAC GAATCCCAGC CAGCCGCCGG CTCCGACGCG
TTGCCGAGCC GCGCCGAGCT CAAGCAGATG CGCCGCGAGC TCAAGCAGCA CACGCAGATG
TTCAACAGCC TGCCGGTGTC GATGTTCGCC AAGCGCTACG AGGGCGCTCG TCCGGGCGTG
TACATCATGG TCAATCCCCT GGCGACCGAG ATCAGCGGCA TCCAGAGCAT CCCGGGCAAG
TCCGACTTCG ACTTCTTCCC CGAAGCCGTG GCCCAGACGC TGCAAGACAA CGATCGCCAG
GTGATGGCGG CGCGCAAGCC GGTCACCGTC GAGGAGTCGT TTCCGGACCG CCGGACGGGA
AAACCCGTGT ATTTGCTGTC TACCAAAGTG CCGCTGCTGC GCGACGACGG CACGCCCTAC
GGCATCGCCG GCGTGTCGGT GGACATCACC GAGCAGTGGC TGTGGAAACA GCGCATGGCC
GCGCTGATGT CGGCGATTCC CGATACCATG ATCCGCGTCG GCCCCGACGG CGTGGTGCTC
GACATCGAGA ACGATCGCGG CATTCTGCCC GCCGGTCGCC TGCGCATCGG CGAATCCATC
TGGGAGCGGC CCGGGCCCAG CCAGGGCCGC CGGCTCATCG AAGCGGCCCT GCGGCAGGCG
CTCGCGAGCG GCGAGCGCAT CGCGGTCGAG ACCAGCGTGG AGACCGACAA CGGAATGCGC
CACTTCGAGA ACCACCTGGT CAAGAGCGGC GAGGACGAGG TGGTCTGGCT GGTGCGCGAG
CTCACCGAGC TCAAGCGCAG CCGCGCCGAA TTGCAGGCGG CCAACGACAA GCTACAGGTC
GTCAACCAGG AGCTGGCGCA GTTCGCCTTC GTGGCCTCAC ACGATCTGCA AGAGCCGCTG
CGCACGGTGC GGACCTTCAC CGAGTTGCTG GGGCGGCGCT ACGCCGACGC CTTCGACGAG
CGCGGCAGGA CGTGGCTCGC CAGCATCAGC AACGGCATGG CCCGCATGCG CACCCTGGTC
GACGACCTGC TGAGCTACTC GCGCGTCGGC CGCATCGAGG ACGACACCCC CTACGATACC
GAGCGCGTGC TCTCGCAGCT CCTGCGCGAC ATGCACACCA GCATCGAGAG CGCCAACGCC
GAGCTCGTGA TCGGCGAGCT GCCGTGGGTG GTCGTGAGCC GGCTCGAGTT GCAGCAGGTG
TTCCAGAACC TGGTCAGCAA CGCGATCAAG TTCCGCCGCA ACGAGGTGCG CCCACGCGTC
GAGATCCACG CCGAGCCCGA TCCTCACGGC TGGGCCTTCA CGGTCTCGGA CAACGGCATC
GGCATCGACG CCGAGCAGCA CGAGCGCATC TTCAATCTGT TTCAACGCCT GCACGCGCGC
AGCGAATACG AGGGCACCGG CATCGGCCTG GCGCTGGTCA AACGCGCCAT CGAACGCCGC
GGCGGGACCA TCACGGTGTC GTCGACGCCG GGCCAGGGCA CGAGCTTTCG CTTCACCCTG
CCCGGCCTAC CCACCGGAGC CGAGCCCGAC ACCGTCGACA GCGACAGCGG TGGCGACCAC
GACCACGACC ACGACCACGA CCACGACCAC GCCGACGACA ACACCGTGCG CTGA
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| Protein sequence | MVIESLIESK LLAVVTVQVA SGQLGRVQQA SVAARALLGY EREASELTGD DALEWRELVA
DESPGQSAGV ALPTGQAVEL ELCRRDGERI PVCVERIDAA DELCLLLLHP RHGHQPPTRP
PARAGGLQDA PAQSSGAFDV SSNKPAFASD ESQPAAGSDA LPSRAELKQM RRELKQHTQM
FNSLPVSMFA KRYEGARPGV YIMVNPLATE ISGIQSIPGK SDFDFFPEAV AQTLQDNDRQ
VMAARKPVTV EESFPDRRTG KPVYLLSTKV PLLRDDGTPY GIAGVSVDIT EQWLWKQRMA
ALMSAIPDTM IRVGPDGVVL DIENDRGILP AGRLRIGESI WERPGPSQGR RLIEAALRQA
LASGERIAVE TSVETDNGMR HFENHLVKSG EDEVVWLVRE LTELKRSRAE LQAANDKLQV
VNQELAQFAF VASHDLQEPL RTVRTFTELL GRRYADAFDE RGRTWLASIS NGMARMRTLV
DDLLSYSRVG RIEDDTPYDT ERVLSQLLRD MHTSIESANA ELVIGELPWV VVSRLELQQV
FQNLVSNAIK FRRNEVRPRV EIHAEPDPHG WAFTVSDNGI GIDAEQHERI FNLFQRLHAR
SEYEGTGIGL ALVKRAIERR GGTITVSSTP GQGTSFRFTL PGLPTGAEPD TVDSDSGGDH
DHDHDHDHDH ADDNTVR
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