| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5067 |
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| Symbol | |
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| ID | 8547478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6987741 |
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| End bp | 6988844 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646389743 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_003269448 |
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| Protein GI | 262198239 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.336988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTGC TAGGCGCCAT TCTCGCCCTC AGCTTGATCA TTGTCGTCCA CGAGGCCGGC
CACTACCTGG TCGCCAAGTG GTGCAAAATG CGCGTGGATC GCTTCAGCAT CGGGTTTGGC
CCGGCGATAG CGAGTTGGAA CCGCGGCGAA ACCAAGTTTC AGCTCGCGCC GATTCCGTTC
GGCGGGTTCG TCGAGATCCG CGGCATGAAC ATCGCCGAGG ACGTCCCACC AGACGATCCC
TACGCGTATC CCAACCGTCC CACCTGGCAG CGCTTCCTGA CCATCTTTGC CGGTCCCGGG
ACCAACTACC TGTTCGCGAC CGTGCTCGCC TTCGTGCTGT TCGCGGTCGC CGGCGTGCCC
AGCGGCACCT CGCACTACGT GGTCAACGGC GTGGCCAGCG AGGGCTTCGA CGCCATCGGC
AAGCTCGAAC CCGGCGACCA GATCATGGCG GTGCAGCGCG CGAGCGACAG CGAGCCGCAG
CCGGTGTACG TGCTCCTGGA CGGCAAGCCG GCCGAGAAGT CGCTGAGCCA GCTCGTGCAC
GAGAGCCAGG GCGCGCCGAT GCAGGTCGAC GTGCTGCGCG ACGGTCAGGC CATGAGCTTC
TCGATCACGG CCCGCCCCGA CCAGGGGCAG ATCAACAAGG AGACCGGCGA GCCTCAGTAC
CGCCTGGGTA TCAGCCTCGA GACCACGCGC GAGCGCGTCG GCGTCGGCCT CGTCGCCGCC
GTGGGCTACG CGGTCGAGTT CCCCATCGAG CACACCAAGC TCGCGCTCGC CAACCTCTAT
CAGATGATCA TGGGCGAGGT CGAAGCCGAG CTGACCGGGC CCGTGGGCAT CGCCGACGTC
ATCCAGCAGT CGATCCGGGT GGGCTGGATC GACGCGATGG CGATGCTGAT CCTGCTCAAC
GTGCTCGTCG GATTGTTCAA CCTGCTGCCC ATTCCGGCGC TCGACGGCGG CCGTCTGGTG
TTCTTGATCT ACGAGATGGC GACGCGTCGC CGGCCCAATC CGCGCTTCGA GGCCACGGTG
CACATGGTCG GCATCATGGT GCTGCTGGTG GTGCTGGTGG CGGTCACGGT CAAGGACATC
GCGCGCATCA TCGAGCGCCT GTAG
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| Protein sequence | MSVLGAILAL SLIIVVHEAG HYLVAKWCKM RVDRFSIGFG PAIASWNRGE TKFQLAPIPF
GGFVEIRGMN IAEDVPPDDP YAYPNRPTWQ RFLTIFAGPG TNYLFATVLA FVLFAVAGVP
SGTSHYVVNG VASEGFDAIG KLEPGDQIMA VQRASDSEPQ PVYVLLDGKP AEKSLSQLVH
ESQGAPMQVD VLRDGQAMSF SITARPDQGQ INKETGEPQY RLGISLETTR ERVGVGLVAA
VGYAVEFPIE HTKLALANLY QMIMGEVEAE LTGPVGIADV IQQSIRVGWI DAMAMLILLN
VLVGLFNLLP IPALDGGRLV FLIYEMATRR RPNPRFEATV HMVGIMVLLV VLVAVTVKDI
ARIIERL
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