Gene Hoch_5065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5065 
Symbol 
ID8547476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6984937 
End bp6985437 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content65% 
IMG OID646389741 
ProductHost attachment protein 
Protein accessionYP_003269446 
Protein GI262198237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.839567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA ACGTATGTGT GGTGACCATG GACGCGAGCC GTGCGCGCTT CTTCGCGCTC 
GATGTGGTGC AGGACTCGAA GAACGGGTGT CTCACTCAGC TCGTGGAGAT CGAGGACATG
GCAAATCCCG GCCGCACAGC ACAGGACAGC GAAATCTTCA CGGAGTCGCG GCCCGGCTTG
CGCTCCGCCT CGGCCAATGG TCCGCGCCAC GGTACCGACG ACCACCGCCA CAGCCACCTC
GACGAGCTCG ACCGCCGCTT TGCCAATGAC GTCAGCGAGG CCCTGGCAAA GCATCTGTCC
GCGCTCGAGG CTGAGCGCGC GGTACTGGTC GCCAATCCGC AGATGATGGG ATTCATGCGC
AAAGCGACCA AGGGCGGCAA CCAGCTCGGC GACGCGCTGT GCGAGGTACA GAAGGACCTC
TCGTGGCTCA CGCCACCGGC GCTCCACGAC CACCTAGCCA AGGATGAGCT GCTGCCGCCG
CGCGGTCGCC TGCAGCGCTG A
 
Protein sequence
MKSNVCVVTM DASRARFFAL DVVQDSKNGC LTQLVEIEDM ANPGRTAQDS EIFTESRPGL 
RSASANGPRH GTDDHRHSHL DELDRRFAND VSEALAKHLS ALEAERAVLV ANPQMMGFMR
KATKGGNQLG DALCEVQKDL SWLTPPALHD HLAKDELLPP RGRLQR