Gene Hoch_5058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5058 
Symbol 
ID8547469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6975954 
End bp6976691 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content72% 
IMG OID646389734 
Productputative lipoprotein 
Protein accessionYP_003269439 
Protein GI262198230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCT CCCTGCGCCT GTCCCTCGCG TTCGCGGCCG CCCTGGCCCT GCTCGCGTCT 
CCCTCTCTCG GCTCGGCCTC GCCCGGCAAG CGCGGCAAAG CGCCCGCGGC CAAGGCCACC
GGCACCATCG TCGGCCACGT CCTGTACCGC GGCACCCCGC CACCGCGCCC GCCGCTGGCG
CGCGACACCG ACCCGGTGTG CGCCAAGACC GCGATGCGCA GCGAGCGCGT GGTGGTCACC
GACGGCAAGC TGCGCGACGC GCTGGTGCGG CTGCCCGCGG GCTCGGCCGG CACGCACGCG
GTCCCGAGCG AAGCCGTGGT GGTCGACCAG CTCGCGTGCA TGTACCGGCC GCGCGTCGTC
GGTGTGATGG CCGGACAATC GCTGGTCGTG CGCAACAGCG ACCCCACCTA TCACAATGTG
CGCGGAACCA AACACGAGCA CACCGAGTGG AACCTGGGGC AGCCGCCCAA GGGCCCCGTG
ATCACGCGCG AGCGCCTGGG CGAGCCGGGC GAGGTCGTGA CCCTGCGCTG CGACGTGCAC
CCGTGGATGC GCGGCTACGC GGTGGTGTCC GATCATCCCT TCTTCGACGT CAGCGGCGAC
GACGGCAGCT TTCGCCTCGA GAACGTGCCC GTCGGCCGCT ACACCGTGGA AGCCTGGCAT
CCCGAGCTCG GTCTCAAGAA GGCCGAGCTC ACGGTGCGCG CGGGCGCCGA GGCGCGCGTG
GACATCGCGT TTCCCTGA
 
Protein sequence
MHASLRLSLA FAAALALLAS PSLGSASPGK RGKAPAAKAT GTIVGHVLYR GTPPPRPPLA 
RDTDPVCAKT AMRSERVVVT DGKLRDALVR LPAGSAGTHA VPSEAVVVDQ LACMYRPRVV
GVMAGQSLVV RNSDPTYHNV RGTKHEHTEW NLGQPPKGPV ITRERLGEPG EVVTLRCDVH
PWMRGYAVVS DHPFFDVSGD DGSFRLENVP VGRYTVEAWH PELGLKKAEL TVRAGAEARV
DIAFP