Gene Hoch_5057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5057 
Symbol 
ID8547468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6974975 
End bp6975838 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content71% 
IMG OID646389733 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_003269438 
Protein GI262198229 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG AAGCCAACGA CAAGCCGGCG CTCGCCCCGG TCCACGCCCT CTCCGAGCTG 
CGCGCTCTGG CCGCCGATGT GGTCGCGATC GCGCGCCGCG CAGGGGACGC CATCCTCGAC
ATCTACGGCG AGGATGACTT CCGCGTGCAG ACCAAGGACG ACGCCTCGCC GCTGACGGCC
GCCGACCTGG CCGCCCATCG CATCATCGCC GATGCCCTGC GCGAGCGCAC GCCCGACATC
CCGGTGCTGT CCGAGGAGTC GGAGTCTCTG CCCTTCGCCG AGCGCGCGTT GTGGCCGCGC
TTCTGGCTGG TCGATCCGCT CGACGGCACC AAGGAGTTCA TCAAGCGCAA CGGCGAGTTC
ACGGTCAACA TCGCGCTCAT CGAGGGCCAC ACGCCGCGCC TGGGCGTGGT GCATCTGCCC
GCGCAGGCGG CGACCTACGT CGGCGTGGTC GGCGACGGCG CCACCAAGCA GATGGGCAGC
GACGAGCCGC AGCCCATCCG CGTGCGCCCG GCCCCGGACA GCGGGCTGCG CGTGGCCGTG
AGCCGCTCGC ATCCCAGCGA GGCGCTCACC GCATTCATCG ATGAGCTCGG CGAGTGCGAG
ACCATCCCGC TGGGTAGCGC GCTCAAGCTG TGCTACGTGG CCGAGGGCGA TATCGACCTG
TATCCGCGCC TGGGGCCGAC CTCCGAGTGG GACATCGGCG CGGCCCAGGC GGTGCTCGAG
GCCGCGGGCG GGCGCGTGGT GTGCGTCGAT GGCAGCCCGC TCAGCTACGG CGCCAAGGAG
TCGCTGCTCA ACCCGTATTT CTTTGCGCTC GGCGACGCCG CGCTGTTGCC GCGGGTGCTG
GCGCTGGCCC CGCAGGCGTC TTGA
 
Protein sequence
MSNEANDKPA LAPVHALSEL RALAADVVAI ARRAGDAILD IYGEDDFRVQ TKDDASPLTA 
ADLAAHRIIA DALRERTPDI PVLSEESESL PFAERALWPR FWLVDPLDGT KEFIKRNGEF
TVNIALIEGH TPRLGVVHLP AQAATYVGVV GDGATKQMGS DEPQPIRVRP APDSGLRVAV
SRSHPSEALT AFIDELGECE TIPLGSALKL CYVAEGDIDL YPRLGPTSEW DIGAAQAVLE
AAGGRVVCVD GSPLSYGAKE SLLNPYFFAL GDAALLPRVL ALAPQAS