Gene Hoch_5053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5053 
Symbol 
ID8547464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6970576 
End bp6971379 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID646389729 
Producthypothetical protein 
Protein accessionYP_003269434 
Protein GI262198225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.609849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTCGC TTCGCGCCCT CGCTCACGCC CCGTGGTCGG CATCGAAAGT TCAGACGGCG 
CTGCGCTGTC CGCGTCTGTT TCACTACCGG TACGTCGACA AGCTGAGCGA GCCCGAGACC
ATGCCCGAGG CGCGCGTCGG CAAAGCCGTG CACGCGCTGC TCGAGCACGT GCTGCAGGGG
CAGGAGCTCG AGGACGCCGA AATCGACGCG CGCGCGCAGC TCGAGAGCGA GCGCGAGCAG
CTCCGCTTCG ATGCCCTGCG CCCGGGCGTC GAGGCCTTTG TCGGCCGTCT GAGCGGGTTT
CGCCAGCGCC GCCGCGTGTA TCGCGAGCTG TTCGAGTACA CGCTGGCGGT GCGCGTGGAT
ATGGTCGCCA CGCAGTTCTA CGCCGGCGAC GCCTTCTACC GCGGCATCAT CGACGCCGCG
TTTCTATTCG ACGACGACAG CCTGGCGCTG GTCGATCACA AAACCGGCCA GCGCGCGGCG
CGGCAGGCCA TCGGCGAGCA GCTCGAGGGC TACGCGGTGC TGGCCCTGGG CTGGTTTCGC
CACCTGCGGC GGGTGTGGCT GGGCGTGCAC TGGGTGGCCG AGCACTGCGT CGATTGGGCG
GAACCCGTCC CGGTGTCCGA GATCCGCACG CGCATGGTGC CGGCGCTGCT GCAGAGCATC
GAGGCCGCGG CCCTGGCCGT GGCCGATGGC CCGCGCCCCA ACCCCGGGTC CTGGTGCGAG
TTCTGCAATT ATCGCTCGGT GTGCCCGGCC GCCATCGAGA TGCGCTTCGA GCGCGTCGAC
GACGAGCCCG ATCCGCACGC CTGA
 
Protein sequence
MASLRALAHA PWSASKVQTA LRCPRLFHYR YVDKLSEPET MPEARVGKAV HALLEHVLQG 
QELEDAEIDA RAQLESEREQ LRFDALRPGV EAFVGRLSGF RQRRRVYREL FEYTLAVRVD
MVATQFYAGD AFYRGIIDAA FLFDDDSLAL VDHKTGQRAA RQAIGEQLEG YAVLALGWFR
HLRRVWLGVH WVAEHCVDWA EPVPVSEIRT RMVPALLQSI EAAALAVADG PRPNPGSWCE
FCNYRSVCPA AIEMRFERVD DEPDPHA