Gene Hoch_5048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5048 
Symbol 
ID8547459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6964993 
End bp6966168 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content74% 
IMG OID646389724 
ProductMannose-1-phosphate guanylyltransferase 
Protein accessionYP_003269429 
Protein GI262198220 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.740178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.315624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACG CAGTGGTCCT CGCGGGAGGG AGCGGCAACC GCCTGTGGCC GGCCAGTCGC 
AAGCGCCGCC CCAAACAATT CCTGTCGCTC GGCGAACACC CGGGCGAGTC GCTGCTGGCC
GCCACCCTGC GCCGCATCGC GCCGCTGTGC GCACCCGAGT ACACCCTGGT GGTCACGGCC
GAGGCCCAGG CCGAACAGGT GCGCGCCGCC CTGCCCTCGC TGCCGCGCGA CAACCTGCTG
GCCGAGCCCA GCCCGCGCAA CACGGCCGCG GCGCTGGGGC TGGCCGCGAC CTACGTGCGC
GAGCGCGATC CCGAGGCCGT CATCGCCGCC CTGCCCGCGG ATCTGTTCAT CGCCGATCCC
GCCGGCTTCG CGCGCGTGGC CGAGCGCGCC TTTGCCGCCG CCGCCGCCCA CGAGGCCATC
GTCACCATCG CCGTGCCGCC CACGCGCGCC GAGCCGGGCT TCGGCTATCT GCGCCTGGGC
GCGCCCATTG TCGATACCAC TACCAAGGAT GGCGCCGCGG CGCGCGACGC GGGCGCGGAT
GCCGCTCGGC AGGCGGCGCG CGACGCAGAC GAGGAGCCGG CCACAGACCT GTTCGCGGTC
GAGGGCTTCG TGGAGAAGCC CGACCCGGCC CGCGCGCGCG CGTTCGTGGC CGACGGCCAG
CACCTGTGGA ACGCGGGCAT GTTCTTCGCC CGCGCCCGCC ACCTCCTCGG CGCCTTTGAG
CGCTACCTGC CGGCCACCCA CGCCGGCCTC GCCACCGTGG CCGCGGCGCT GCGGGTCGGC
GGCCCGGCAG CCGCAGCCGA GGCCGCGCGC AGCGTGTATC CGGTGCTGCC GGCGATCTCC
TTCGACCACG GCGTGCTCGA GCACACCCGC GCGCTGCTGG CCGTGCGCGG CGATTTCGGC
TGGAACGATG TCGGCTCCTG GAGCAGCCTG GCCGCGCTGC GGGCGGACGA GGCCGATCCC
GCGGGCAACG TGGTCCAGGG CCGCGCGGTG CTGCACGAGG CCCACGACAA CGTCGTATTC
TGCGACAGCG AGCACGTGAT TTCGCTGATC GGCGTCCAGG GCCTGGTGGT GGTACAGTCC
GGCGACGGTA TCCTGATCGT GCCGCGGGAA CGCGCGCAGG ACGTCCGCGA GGTCGCCAGC
GCGCTCGAAC GCCGGGCGCT GGATAGACAT CTCTGA
 
Protein sequence
MRYAVVLAGG SGNRLWPASR KRRPKQFLSL GEHPGESLLA ATLRRIAPLC APEYTLVVTA 
EAQAEQVRAA LPSLPRDNLL AEPSPRNTAA ALGLAATYVR ERDPEAVIAA LPADLFIADP
AGFARVAERA FAAAAAHEAI VTIAVPPTRA EPGFGYLRLG APIVDTTTKD GAAARDAGAD
AARQAARDAD EEPATDLFAV EGFVEKPDPA RARAFVADGQ HLWNAGMFFA RARHLLGAFE
RYLPATHAGL ATVAAALRVG GPAAAAEAAR SVYPVLPAIS FDHGVLEHTR ALLAVRGDFG
WNDVGSWSSL AALRADEADP AGNVVQGRAV LHEAHDNVVF CDSEHVISLI GVQGLVVVQS
GDGILIVPRE RAQDVREVAS ALERRALDRH L