| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5042 |
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| Symbol | |
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| ID | 8547453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6957393 |
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| End bp | 6958901 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646389718 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_003269423 |
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| Protein GI | 262198214 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.384072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCGC TCCCCAAGCT CATCGTCACC GTCGCGCTCT CGGTCGCCCT TGGCGTCGGA
TTGATCATCT GGCAGGCCCA CTACCAGGCC AACCAGATCG CCGAGCAGGG CACCAAGGTG
CTGCTCGACG TGCTCACGCG CGAGCAGCAC GCGCGCTGGC AACGGGAGAC CGTGCAGCTG
GCCACCGCGC TCGGCGACGG CCGCGCCGAG CTCGCGCCCG GGCCCCGGCT GCGGCGTATC
CTCGACCTGC CGTCCGAATT CAAGCACGCG CGCATCCTCG ACGCCGAGGG CGACGACCTC
GCGGTCGCCC ACGCGTCCAT GGAGAGCTCG TTCACCGACA ACGAGCTCGA CAAGGACGCG
CTGCTGGCCG CCTGGCGCGA GCGCGCCGAC CCCGAGCTGC CGCTGGCCGA GATCGAAGAC
CCCGAAGATC AGCGCGTGTA CATGATCACC TCGCTGAGCG ACGCTGGCGA GGGCGCCTAT
TTCGTCACCG GGTATTCGGG CGCACCGCTC GCCGCGATCG CCGCCGACCT CGAGCGCCAT
CACCACACCG AGGCGCGCAC ATCGCTCGAG CTGCTGGTGT TGATCGGCAT CGGCGCCGAG
TTGCTCGCCG TCATCGGTCT GTTCCTCATC CTGCGCCGCC GCGCCGAGCC CGACGACGCG
ATTCCCCAGT TCGCGCCCGC GGCCACCGCG CGCTCGGGCC CGGCCCTGCA CGACATGGCC
GGCGAGCTGG CCGTGCTGCT GCAGGAGACC GCGGCCAAGT CGCGTATGGA TAAGGATCTG
GAGATCGTCC AGACCGTCCA GAATACGCTG CTGCCGGCCG ACGAGTTCGT CGAGCGCGGG
CGCCTGTCCT TCGCCGGCAA GCTGCACTCG GCCGGCACCT GCGGCGGCGA CTGGTGGACC
TACCACGACC TCGCCGACGG CACCGTGCTG CTGGTGCTCG GCGACGTCAC CGGCCACGGC
CCCAGCGCCG CCATGCTGAC CGCGGCGGCC AAGGCGGCCT GCGACCTCGC CTGCGACATG
CACGACCACC TCCCGAGCCC GGCCGCGGTG CTCAACCTGA TGAACCAGGC GGTGTTCCAC
GCTGGCGGCC GGCGCCTGCT CATGACCTGC TTTGCCATCA TCATCGACCC GCGCACGGGC
GCGGCGCAGT TCGCCAACGC CGGCCACAAC TTCCCCCTGC TGGCGCACCA GGAGCCCGGC
CAGGACGAGG TGCAACTGAC CTCGCTGATC GCGCGCGGCA ACCGCCTCGG CGACTCGCGC
GAGTCGCACT TCGAAATGGT CAGCGCCACC CTGGAGCCTG GTGATCGCCT GCTGCTGTAC
ACCGACGGCA TCATCGAGTG CGAGAACTCG CAGGGCTCGG CCTACGGCGC GCGCCGCATG
CGCGAGCTGA TCGCCGGCGC CGCGTCCGAG CCCGTCGCTC TGCGCGACGA GCTCATCCGC
AGCGCGCTCG AGTTCGCCGA AGGCAAACTC GACGACGACC TCACCCTGGT CGCCGTGCGC
TTCGCCTAG
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| Protein sequence | MLPLPKLIVT VALSVALGVG LIIWQAHYQA NQIAEQGTKV LLDVLTREQH ARWQRETVQL
ATALGDGRAE LAPGPRLRRI LDLPSEFKHA RILDAEGDDL AVAHASMESS FTDNELDKDA
LLAAWRERAD PELPLAEIED PEDQRVYMIT SLSDAGEGAY FVTGYSGAPL AAIAADLERH
HHTEARTSLE LLVLIGIGAE LLAVIGLFLI LRRRAEPDDA IPQFAPAATA RSGPALHDMA
GELAVLLQET AAKSRMDKDL EIVQTVQNTL LPADEFVERG RLSFAGKLHS AGTCGGDWWT
YHDLADGTVL LVLGDVTGHG PSAAMLTAAA KAACDLACDM HDHLPSPAAV LNLMNQAVFH
AGGRRLLMTC FAIIIDPRTG AAQFANAGHN FPLLAHQEPG QDEVQLTSLI ARGNRLGDSR
ESHFEMVSAT LEPGDRLLLY TDGIIECENS QGSAYGARRM RELIAGAASE PVALRDELIR
SALEFAEGKL DDDLTLVAVR FA
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