| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5035 |
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| Symbol | |
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| ID | 8547445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6946379 |
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| End bp | 6947788 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646389710 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003269416 |
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| Protein GI | 262198207 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.88746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTCTT CCAGCCCGAG CGCTCCCCAT CTGACCCCCG ATGGGGCGCC ACCTCTCGAG
CCCCAGCGGG TCATCACCCG GCGGCTCATC AACCTGGCGC TGCCCGTCGT CGGCATCAAC
GTACTCAACG TCGCGTCGCT GACCATCGAC ACCGCCATGG TCGGACGGCT GGAAGGCGCC
GAGACCCACC TCACCGCGCT CGGTTACGCC ACCCAGATCA CCTTCCTGCT GATGGTGGTG
ATGATGGGTC TGGCCATCGG CACCGTGGCC CTGGTGGCGC GCGCCTACGG CGCTGGCGAC
AACCAGCGCG TCAACCGCGT CCTCGGCCAA TCGACCCTGC TCACCGGCCT GCTCGGCGTG
CTCATCGCCA TCGTCGGCAA CCTGCTCGCG CCCCAGCTCC TGCTGCTGCT GGGCGCCTCC
GAGGCGTCGC TGGCCAGCGG CCTGGCGTAC CTGCGCCCGG CGCTGAGCGG CACCGTCTTC
TTCTACCTCA CCATCCTCTA CGGCTCGGTG ATGCGCGGCG TCGGCAACAC CCGCCTGCCC
TTTCTCGTCG CCCTGCTGGC CACCGGGCTC AACATCGGCC TCAACTACGC GCTGATCTAC
GGTCGCTGGG GCATGCCGGC GCTCGGCATC CAGGGCGCCG CCATCGGCAC CGTGGTGTCG
CAGGCGGTGA GCGCCCTCCT GCTGGGCGCG GCCATGCGCC GGGGCATGAT CGGCGACCTG
CGCCTGCCGC TGCGCATCGA GCGCATCGAC ATGGGCCTGG CGCGCGAGCT GGCGCGCATC
GGCTGGCCCG CGGCCCTCGA CATGGTCGTG CTCAACGCCG GCTTCCTCTC GATCGTGTTC
ATGCTCGGCC GCATCGACGA GCTGGCCGTG GCCGCCCACG GCATCGGCAT GCGCATCCAG
GCGCTGGCCT TCGTGCCCGG CCTGGCGGTG TCGCAGGCCA CCGGCGCGCT CGTCGGCCAG
GCCCTGGGCC GCGGCAGCAT CGAGGAGGCG CGCCAGACCC TGCGCGCCTC GGTGCTCCTG
TGCGAGGCCA TCATGAGCGC GCTGGCGCTG GTCTTTTTCG TCTTCGCCGC CGACATCGTG
ACCATCTTCG ACGTCGCCCG CGGCACCCCG CTCTCCGACT ACGCCGTCAT CTGGATCCGC
TCGCTGGGCG CGTGTATGCC CATGGCCGCC GGCTTCATCG CCATCGCCGG CCTGTTGCAG
GGCAGCGGCG CCACCCACCT GAGCTTGCGC ATCAACCTGC GCACCGTGTT CCTGGCCCAG
ATCCCGCTCA GCGGCCTGCT CGGCTTCGTC TTCGACATGG GCGCGCTCGG CGTATGGCTG
GGCTTTCCGC TCGGCTTTGG CGTCAAAGTG CTGCTCGCGA TGCGCGCCTA TCGCCGCGGC
GAATGGATCA AGCTCGGCGT TCACGCGTGA
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| Protein sequence | MSSSSPSAPH LTPDGAPPLE PQRVITRRLI NLALPVVGIN VLNVASLTID TAMVGRLEGA
ETHLTALGYA TQITFLLMVV MMGLAIGTVA LVARAYGAGD NQRVNRVLGQ STLLTGLLGV
LIAIVGNLLA PQLLLLLGAS EASLASGLAY LRPALSGTVF FYLTILYGSV MRGVGNTRLP
FLVALLATGL NIGLNYALIY GRWGMPALGI QGAAIGTVVS QAVSALLLGA AMRRGMIGDL
RLPLRIERID MGLARELARI GWPAALDMVV LNAGFLSIVF MLGRIDELAV AAHGIGMRIQ
ALAFVPGLAV SQATGALVGQ ALGRGSIEEA RQTLRASVLL CEAIMSALAL VFFVFAADIV
TIFDVARGTP LSDYAVIWIR SLGACMPMAA GFIAIAGLLQ GSGATHLSLR INLRTVFLAQ
IPLSGLLGFV FDMGALGVWL GFPLGFGVKV LLAMRAYRRG EWIKLGVHA
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