| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5030 |
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| Symbol | |
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| ID | 8547440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6940036 |
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| End bp | 6940782 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646389705 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003269411 |
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| Protein GI | 262198202 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.574158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.46394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA ATCGTATCGC CCTCGTCACC GGCGCCTCCC GCGGAATCGG CGCGGCCACG
GCCCGGCTCT TCGCCGCGCA CGGCGCCGCG GTAGCCGTCA ATTACCATCG CAATCAGGCC
GCCGCCGAGG CCGTGGTCGA GGACATCGAA GCCGCCGGCG GGCGCGCGCT CGCCGTGGGC
GCCGACGTCA CCGACGAGGC CCAGGTCGAG GCCATGGTCG AGCGCGTACG CGACCAGCTC
GGCGCCGTCG ATCTGCTGGT GCTCAACGCC GGCGTCCCGC CGCACACCGC GCCGCTGGTC
AGCGACCGCT GGCGCGACTT CGAGCGCAAG CTCACGCTCG AGCTCAAGGC CGCCTTCCTC
ACCACCCAGG CCGTGCTCCC GGACATGCTC GAGGCCGAAC GCGGCTGCAT CGTCGCGGTC
TCGAGCACGG TCGCCCGCCA CGCCACGCCC GCGCTCGGTG CCCACGCCGC GTCCAAAGCC
GCGCTCGAAT CCTACGCCCG CACCCTGGCG GTGGAGCTCG GCCCCCGCGG CGTGCGCGTC
AACGTGGTCG CCCCCGGCGT CATCCGCACC GACGCCACCA AGCACATCCC CGAATCGCAC
CAGCGCGCCA TCGCCAAGAT GACGCCCCTG CGCCGCAGCG GCACCCCCGA GGACGTCGCC
GGCGCCATCC TCATGCTCGC CGCCGATCAC ACCGGCTTCG TCACCGGCGC CTACGTGCAG
GTCGACGGCG GCCTGCAGCA ACGCTGA
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| Protein sequence | MLRNRIALVT GASRGIGAAT ARLFAAHGAA VAVNYHRNQA AAEAVVEDIE AAGGRALAVG
ADVTDEAQVE AMVERVRDQL GAVDLLVLNA GVPPHTAPLV SDRWRDFERK LTLELKAAFL
TTQAVLPDML EAERGCIVAV SSTVARHATP ALGAHAASKA ALESYARTLA VELGPRGVRV
NVVAPGVIRT DATKHIPESH QRAIAKMTPL RRSGTPEDVA GAILMLAADH TGFVTGAYVQ
VDGGLQQR
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