Gene Hoch_5007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5007 
Symbol 
ID8547417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6905849 
End bp6906502 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID646389683 
ProductUspA domain protein 
Protein accessionYP_003269389 
Protein GI262198180 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.773862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAGGC CTGAAAATCG TCCTTTTTCT ATCGTCGTCG GCTTCGACTT TTCCGAGCTC 
GGCAAACTCG CGCTCGCAGA GTCCATGGGC CTGGCATCCC TCAACGACCG CACCGTGTTG
CACATTATCG GTGTCGTCGA TAGCTCGTCC GGCCTGGGAC CGGTCGAACC CGAGTCCAAA
GCCGATCACG AAACCGTTGC TCAGGTGCAG CAGGAGATCA TCCAGGTGGT CGAGGGCAAG
ATCAAAAAGT ATTCGCCCTC GGACTTCCGC TGTTTCATCC ATGTTCGCCT GGGCGAGCCG
GCCGAGGAAA TCATCAGCCT CGCCGAGGAG TCGGGGGCCG ATATCGTCGT CATCGGCAGC
CACGGCCGCA GCGGCATCGA ACGGCTGCTT CTGGGCTCGG TGTCCGAGAA GGTGGTGCGC
GACGCGCCCT GTCCGGTGCT GGCGATGCGT CCGCGCCGCG CGGATCTCGA TATGGAGAGC
GACGTAATCG AGCCTCCGTG CCCCGAGTGC GTGAATCGCC GCGTCGAGAC CAACGGCGCC
GAGTGGTGGT GCGCGGCGCA CAGCAAGACC TACGTGCCGC CGCATCGCTA CTCGTACTCG
AGCGGTATCG TCGACCCGAT CGCCCCGGAC TCGTGGTCGA TTTTCAATCA CTGA
 
Protein sequence
MRRPENRPFS IVVGFDFSEL GKLALAESMG LASLNDRTVL HIIGVVDSSS GLGPVEPESK 
ADHETVAQVQ QEIIQVVEGK IKKYSPSDFR CFIHVRLGEP AEEIISLAEE SGADIVVIGS
HGRSGIERLL LGSVSEKVVR DAPCPVLAMR PRRADLDMES DVIEPPCPEC VNRRVETNGA
EWWCAAHSKT YVPPHRYSYS SGIVDPIAPD SWSIFNH