Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5007 |
Symbol | |
ID | 8547417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 6905849 |
End bp | 6906502 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646389683 |
Product | UspA domain protein |
Protein accession | YP_003269389 |
Protein GI | 262198180 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.773862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCAGGC CTGAAAATCG TCCTTTTTCT ATCGTCGTCG GCTTCGACTT TTCCGAGCTC GGCAAACTCG CGCTCGCAGA GTCCATGGGC CTGGCATCCC TCAACGACCG CACCGTGTTG CACATTATCG GTGTCGTCGA TAGCTCGTCC GGCCTGGGAC CGGTCGAACC CGAGTCCAAA GCCGATCACG AAACCGTTGC TCAGGTGCAG CAGGAGATCA TCCAGGTGGT CGAGGGCAAG ATCAAAAAGT ATTCGCCCTC GGACTTCCGC TGTTTCATCC ATGTTCGCCT GGGCGAGCCG GCCGAGGAAA TCATCAGCCT CGCCGAGGAG TCGGGGGCCG ATATCGTCGT CATCGGCAGC CACGGCCGCA GCGGCATCGA ACGGCTGCTT CTGGGCTCGG TGTCCGAGAA GGTGGTGCGC GACGCGCCCT GTCCGGTGCT GGCGATGCGT CCGCGCCGCG CGGATCTCGA TATGGAGAGC GACGTAATCG AGCCTCCGTG CCCCGAGTGC GTGAATCGCC GCGTCGAGAC CAACGGCGCC GAGTGGTGGT GCGCGGCGCA CAGCAAGACC TACGTGCCGC CGCATCGCTA CTCGTACTCG AGCGGTATCG TCGACCCGAT CGCCCCGGAC TCGTGGTCGA TTTTCAATCA CTGA
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Protein sequence | MRRPENRPFS IVVGFDFSEL GKLALAESMG LASLNDRTVL HIIGVVDSSS GLGPVEPESK ADHETVAQVQ QEIIQVVEGK IKKYSPSDFR CFIHVRLGEP AEEIISLAEE SGADIVVIGS HGRSGIERLL LGSVSEKVVR DAPCPVLAMR PRRADLDMES DVIEPPCPEC VNRRVETNGA EWWCAAHSKT YVPPHRYSYS SGIVDPIAPD SWSIFNH
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