| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5002 |
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| Symbol | |
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| ID | 8547412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6897859 |
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| End bp | 6900348 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646389678 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_003269384 |
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| Protein GI | 262198175 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.324843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAGCC TAACCCCCGA ACTTCAAGCC ACGATCCGGC GCGCGGTGGA CGATGTCCGC
AAACGGCGCC ACGAATACCT GACCCTCGAG CACCTGCTCT TGGCCATGCT CGACGACGAG
AGCGCGGTGC GCGTGCTGCG CAACTGCGGC GCCGACGTCG GCAAGCTGCG CATCGATCTC
GAGGAGTTTC TCCACGAGAA TTGCGAGGTC CTGCCCGAAG GCGCCGAGAT CGGCCCCGAG
CAGACGCTGA GCTTTCAGCG CGTGCTGCAG CGCGCGGCCC TGCACGCCAG CGGCGCCGGC
CGTGAGCAGG TGACCTCCGG GAACATCCTG GCCTCGCTGT ACCGCGAGCC CGACTCGCAC
GCGGTGTACT TTCTCGAGCA GCAGGACGTC ACCCGCTTCG ACGTGGTCCA GTACATCAGC
CACGGCGTCT CCAAGATGGA GCCGGGCAGC GGCGCGCCGA GCGCGCGCGG CGTGCTCGAG
GACAGCGAGG AGCCGGTCGC CGATCCGCTG AGCGCGTTCA CCACCGATCT GCTCGAGCGC
GCGGCCCAGG GCCGCATCGA TCCGCTGATC GGGCGCGACA TGGAGCTCGA GCGCACCATC
CAGGTGCTGT GCCGGCGGCG CAAGAACAAC CCGCTGTTCA TCGGCGAGCC CGGCGTGGGC
AAGACCGCGC TGGCCGAGGG CCTGGCGCTG CGCATCCACG AGGGCAAGGT GCCCAAGGCG
CTGCGCGAGG CGCGCGTGTA CGCGCTCGAC ATGACCGCGG TGCTGGCCGG CACGCGCTAC
CGGGGCGACT TCGAGGAGCG CCTCAAGGCG GTGATGGGCG AGCTCACCAA AGACGAGCAC
GCCATCCTGT TCATCGACGA GATCCACAAC ATCGTCGGCG CCGGCGCGAC CACGGGCGGC
ACCATGGACG CGGCCAACAT CCTCAAGCCC GCGCTGGCCT CGGGCGAGCT GCGCTGCATC
GGCTCGACCA CGTACAAGGA CTACCGCACC GCCTTCGAGC GCGACCGCGC GCTCTCGCGC
CGCTTCCAGC GCATCGACAT CGCCGAGCCC AGCGTGGCCG ACGCGGTGCG CATCCTGCAC
GGCCTCAAGA GCCGCTACGA AGGCCATCAC GGCGTGCGCT ACACCGACGC CGCGATCGAG
TCGGTGGCCG AGCTGGCGGC GCGGCACATC ACCGGCTCGC ACATGCCCGA CAAGGCCATC
GACGTGATGG ACGAGGTCGG CGCGCGGGCG CGGCTCACGC CGGTCAAGGT CGGCGAGGAC
GGCCGGCGCA AGCGCAAGGC CCGCATCGTG CCCAAGGACA TCGAGGAGAT GGTCGCCAAG
ATGGCGCGCA TCCCCACCAA ATCCGTCAGC TCGTCCGACA AAGCCAAGCT GTCGAGCATC
GAGGATGAGC TCAAGCGCGT CATCTACGGC CAGGACGAGG CGGTCGAGCG TCTCGCCGAA
TCGATCAAGC TGTCGCGCGC CGGCCTCAGC CACCCCGACA AGCCCACCGG TTGCTTCCTC
TTTGCCGGCC CCACGGGCGT GGGTAAGACC GAGCTGGCCA AGCAGCTCGC CGGGGTGCTC
GGCGTCGAAT TTTTGCGCTT CGACATGAGC GAATACATGG AGAAGCACAC GGTGTCGCGT
CTCATCGGCG CGCCTCCGGG ATACGTCGGC TTCGACCAGG GCGGCCTGCT CACCGACGCG
GTCAACAAGC ACCCCTACTC GGTGGTGGTG CTCGACGAGA TCGAGAAGGC GCACACCGAC
ATCTTCAACA TCCTGCTGCA GGTGATGGAC CACGCCACCC TCACCGACAA TAACGGACGC
AAGTCCGATT TCCGCAACAC CATCCTGATC ATGACCACCA ACGCCGGCAG CCGCGAGATG
GCGGCCGGTC GCATCGGCTT CGGACTGGCG GCGGGGCTAG CCGACACCAG CGAGGGCCGC
AAGGCGCTCG AGCGCCTGTT CACGCCCGAG TTCCGCAACC GCCTCGACGC CACCATCTTC
TTCGACGCTC TGTCCGAGGA GGTGATCACG CGGGTGGTGA GCAAGTTCCT CACCGAGCTC
GAGGGCCAGA TCTTCGACAA GCACGTGACC CTCGAAGTCA CCGACGCGGC CAAGGCGTGG
TTTGCCGAGA ACGGCTACGA CAAGGCCTTT GGCGCCCGGC CCATGGCTCG GCTGATCCAG
AAGACGCTCA AGGCGCCGCT GGCCAACGAG CTGCTCTTCG GCGAGCTGCA GAGCGGCGGC
GTCGCCAAGA TCGACCTGGT CGAGGGCGAG ATCCGCGTGC TCTGCCAGCC GCGCGAGATT
CCCCCGGAGG AGCTCGAGCG CGCGGCGCAG CCCGACGCCA GCGACGAGGA CGACGGCTGG
GAGGAGGTCT CCGACGACGA CGACGAGGCG TACGAGGAAG ACGCCTACGA CGAGGACGAG
GACGATGACG AGGACGCCTA CGAGGACGAG TACGACGAGT ACGACGACGG GGACGACGAA
GACGAGGACG AGGACAAGCT CCTCAATTGA
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| Protein sequence | MLSLTPELQA TIRRAVDDVR KRRHEYLTLE HLLLAMLDDE SAVRVLRNCG ADVGKLRIDL
EEFLHENCEV LPEGAEIGPE QTLSFQRVLQ RAALHASGAG REQVTSGNIL ASLYREPDSH
AVYFLEQQDV TRFDVVQYIS HGVSKMEPGS GAPSARGVLE DSEEPVADPL SAFTTDLLER
AAQGRIDPLI GRDMELERTI QVLCRRRKNN PLFIGEPGVG KTALAEGLAL RIHEGKVPKA
LREARVYALD MTAVLAGTRY RGDFEERLKA VMGELTKDEH AILFIDEIHN IVGAGATTGG
TMDAANILKP ALASGELRCI GSTTYKDYRT AFERDRALSR RFQRIDIAEP SVADAVRILH
GLKSRYEGHH GVRYTDAAIE SVAELAARHI TGSHMPDKAI DVMDEVGARA RLTPVKVGED
GRRKRKARIV PKDIEEMVAK MARIPTKSVS SSDKAKLSSI EDELKRVIYG QDEAVERLAE
SIKLSRAGLS HPDKPTGCFL FAGPTGVGKT ELAKQLAGVL GVEFLRFDMS EYMEKHTVSR
LIGAPPGYVG FDQGGLLTDA VNKHPYSVVV LDEIEKAHTD IFNILLQVMD HATLTDNNGR
KSDFRNTILI MTTNAGSREM AAGRIGFGLA AGLADTSEGR KALERLFTPE FRNRLDATIF
FDALSEEVIT RVVSKFLTEL EGQIFDKHVT LEVTDAAKAW FAENGYDKAF GARPMARLIQ
KTLKAPLANE LLFGELQSGG VAKIDLVEGE IRVLCQPREI PPEELERAAQ PDASDEDDGW
EEVSDDDDEA YEEDAYDEDE DDDEDAYEDE YDEYDDGDDE DEDEDKLLN
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