| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5000 |
|---|
| Symbol | |
|---|
| ID | 8547410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 6895772 |
|---|
| End bp | 6896941 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646389676 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003269382 |
|---|
| Protein GI | 262198173 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.704682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTTATG CTCGCGGCCT GATGCGACCG ATGACCATCG CCCACGTGCT GGGCTCGTTT
GGGATGGGCG GGGCCGAGCG GGTGGCCCTG GATCTTGCGT CTGCGCAGCG CTCGCTCGGA
CTCGATGTCT TGGCCGTATC CTTTGCCGGC GGCTCCGAGG GACCGCTCGG GCCGATGTTC
CGCGAAGCCG GCATTCCCGT CCACACCATC CCCAAGCGGC CGGGTATCGA CCTCACCCTG
CCGCCGCGCG TGGCCCGCCT GCTGGTGCGC GAGCGCGTCG CCGTGCTGCA CACCCACAAC
CCGCAGCCGC TCATCTACGC GGCGCCCGCC GGCCGCGCGG TCGGCACCGC CGTGGTCCAC
ACCAAGCACG GCGAGGGCCA CATGGGCTCG AGCGGCGAGA AGTCCCTGCG CCGGCTGACC
GCCCCCTTCG CCCAGATCTT CGTCGCGGTG TCCGAAGAGA CCGCCGCCCA GGCGCGCGCG
CAGCGCGACT GCCCGCTCGA GCGCCTCACC GTGGTGCCCA ACGGCATCGG CCTGGGCCGC
TTCGCACCCG ACGACGAGAT CCGCCGCGAG GTCCGCGCCG AGCTCGGCAT CTCCGAGGAC
GCCTGGGTGG TGGGCACGGT CGGACGCGTG GACGACAACA AGAACCAGAG CGCGCTGGTG
CGCGCCATGG CGCCGCTGCT CAGCGACGAG GTCCACCTGG TGCTGGTCGG CGACGGGCCG
GCCATGGACA CCTTGCGCGC GGCCCGCGAG GCGGTCGATC GCAGCGATCG CGTGCACATC
CTCGGGCGCC GCACCGACGC CAACCGGCTG TATCGCAGCT TCGACGTGTT CGCCCTGCCC
TCGCTCAGCG AGGGTCTGCC GCTGGTCATC CCCGAGGCCA TGGCCTGCGG TCTGCCGGTG
GTGAGCACGG CCGTCGGCGG CATCCCGGCC GTGGTGCTCG ACGGCGAGAC CGGCCTGCTG
GTGGCCCCGG ACGATGAGGT CACCATGCGC GCGGCGCTCG CCCACCTGGG CTCGCAGCGC
CAGCGGGCGC GCGCTTTCGG ACGCGCGGGT CGGGCACGCG CGCTGAGCGA GTACTCGGTC
GAGCGCATGA GCCGCGACTA CCTGTCGCTG TACGAGCGCG CGCTGGATCA GGCCGGTCCG
CTGACGCGCG CGTGGCGTCG CCGGCCCTGA
|
|---|
| Protein sequence | MRYARGLMRP MTIAHVLGSF GMGGAERVAL DLASAQRSLG LDVLAVSFAG GSEGPLGPMF
REAGIPVHTI PKRPGIDLTL PPRVARLLVR ERVAVLHTHN PQPLIYAAPA GRAVGTAVVH
TKHGEGHMGS SGEKSLRRLT APFAQIFVAV SEETAAQARA QRDCPLERLT VVPNGIGLGR
FAPDDEIRRE VRAELGISED AWVVGTVGRV DDNKNQSALV RAMAPLLSDE VHLVLVGDGP
AMDTLRAARE AVDRSDRVHI LGRRTDANRL YRSFDVFALP SLSEGLPLVI PEAMACGLPV
VSTAVGGIPA VVLDGETGLL VAPDDEVTMR AALAHLGSQR QRARAFGRAG RARALSEYSV
ERMSRDYLSL YERALDQAGP LTRAWRRRP
|
|---|
| |