Gene Hoch_4992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4992 
Symbol 
ID8547402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6884692 
End bp6885834 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID646389668 
Producthypothetical protein 
Protein accessionYP_003269374 
Protein GI262198165 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.369679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCA CTGCCTTCTG GGCCAAGGGC TTTCGCAGCT TCGACGATAT GCACCTCGAC 
GGGCTCGGCG CCTTCAACAT CTTCTACGGC CCCAACGGCG TCGGCAAATC CAACATCCTG
GCCGCGATGA AGACGCTCTT TGGCCAGCTG GCGTGGCGCA GCGAGGCCGC CCGCGGCTTC
CGTCTGATCG CCAGCCCCGA GCCCTTCGAC GGCAGCGAGC AGGTGGTCGG CGCCCGCGAC
CGCAGCCACT TCCGCGCCAG CGGCAAGCTG GTCCTTGGCC GCAGCGACGA CGACCCGGTG
GACGGCGAGC TGTGGCCCAA GCGCCGCGAG CTGCTGGTCG AGGTCACCTA CGACTGGTTC
AAGAACGCGG TCGCGGTGCC CATCCTCGAG GTCTCGCAGC CGGGCGCGGC GCCCAATTCG
CCCGCGCGCA TGGCCTTCGA TCTGCTGCTG CGCGAGCAGG ATGACGAGTT GGTCGGCCGG
GTCCAGGCGC TGGTGCACGC GGTCGCCGGG CGCCTGTTCG CCCTGATCGG GGCCGACCGC
GTGCCGCGCC CCGAGCTGCT GTCGCGCCAG CAGAACGACA TCCCGGCCAT CCTCGCCGCC
GGCCGCCTCA GGGAGGGGCT GTTCCGCGCC AGCACGCATC CCGAGCCGAG CGTGCGCCAC
CGCTTCAAGC GGCTGCAGGC GCTGCTCGCC GGCCCGCCCC TGAACCGCCA GCCCTTCGAG
CTGGTGCACG ACGCCCAGAG CGGCGCGGTC GAGCTGGTCG AGAGCGCGTT CGAGAGCCCG
CGCACGCCGG CCGAGGTGCC GCTCGATCTC ATCGGGCTCG GGGTCACGCA GATCTACAGT
ATCCTCGGCC AGATCCTGCT GCGCGACGCC CGCGCCGTGG CCATCGAGGA TCCCGAGGCC
CACCTGCACG CCCCGAGCAC GGGCATGCAT CTGCGCCAGA TGCTCGAGCG CCTGGTCGCC
GAGAACTACA TCGACCAGCT CTTTCTCACC ACCCACACCG GCCTGTTCAA CCTCGATCCC
GATGGCTACT TCGACGTCTC TCTGGGTTCC CGCGGCACCA CGCAGATCGC CCGCAAACCG
TTCTCACAGC TCAACGGGGC CCGCTACCCG ACCGACGAGA TCACCATCCC GGGCGACCTC
TGA
 
Protein sequence
MRITAFWAKG FRSFDDMHLD GLGAFNIFYG PNGVGKSNIL AAMKTLFGQL AWRSEAARGF 
RLIASPEPFD GSEQVVGARD RSHFRASGKL VLGRSDDDPV DGELWPKRRE LLVEVTYDWF
KNAVAVPILE VSQPGAAPNS PARMAFDLLL REQDDELVGR VQALVHAVAG RLFALIGADR
VPRPELLSRQ QNDIPAILAA GRLREGLFRA STHPEPSVRH RFKRLQALLA GPPLNRQPFE
LVHDAQSGAV ELVESAFESP RTPAEVPLDL IGLGVTQIYS ILGQILLRDA RAVAIEDPEA
HLHAPSTGMH LRQMLERLVA ENYIDQLFLT THTGLFNLDP DGYFDVSLGS RGTTQIARKP
FSQLNGARYP TDEITIPGDL