| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4987 |
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| Symbol | |
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| ID | 8547395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6874511 |
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| End bp | 6876985 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646389661 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_003269369 |
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| Protein GI | 262198160 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00166311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.674678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTCA AGAACGACAA AGATGAATCT GACGAGGGCA CGCCCACGCG TAGCCTTCCC
CTTTTGCCGC TGCGCGACAT CATCGTTTTT CCGCACATGG TCGTGCCTCT GTTCGTGGGC
AGGGAAAAGT CCATCAACGC CCTCGAGGAG GCGATGGAGG CCGATAAGGA GCTGCTGCTC
GCGGCTCAGA AGAAGGCCAA GACCAACGAT CCGCGCGAGG ACGACATCTT CAGCGTCGGC
ACCGTGGGTC ACATCATCCA GCTCCTGCGC CTGCCCGACG GCACGGTCAA GGTGCTGGTC
GAGGGCAAGC AGCGGGCCCG CATCCTGGGC TACGAGCAGA CCTCGCCCTT CTTCCTGGCC
GAGGTCCAGG AGATCGCGGA GCCCGACGAG CGCACCGTGG AGATGCAGGC GCTGATGCGC
TCGATCCAGA CGGTGTTCGA GAACTACGTC AAGCTCAACA AGCGCATCCC GCCCGAGTTC
CTGGTCAGCG TGCAGACCAT CGAGGACCCG GCCCGGCTGG CCGACACCAT CGTCGCCCAG
GTGTCGCTCA AGCTCAAAGA CAAGCAGGAG ATCCTCGAGA CGGTGTCTCC GGCCAAGCGC
CTCGAGCGCC TGTACGAGCT GATGCAGGCC GAGATCGAGA TTCTCCAGGT CGAGAAGAAG
ATCCGCACGC GGGTCAAGAA GCAGATGGAG AAGTCGCAGA AGGAGTACTA CCTGAATGAG
CAGATGCAGG CGATTCAGAA GGAGCTCGGC GACCGTGACG AATTCAAAAA CGAATTGAAC
GACCTGGAAC AGAAGATCAA GCAGAAGCGC ATGAGCCTCG AGGCCCGCGA GCGCTGCCTC
AAAGAGTTCA AGAAGCTCAA GATGATGTCG CCGATGAGCG CCGAGGCGAC GGTGGTGCGC
AACTACATCG ACTGGGTGCT GGCGCTGCCG TGGGACGAGA AGTCCGACGA CCGCACCGAC
ATCATCGAGG CCGAGAAGAT CCTCGAGGCC GACCACTACG GTCTCAACAA GGTCAAGGAG
CGCATCCTCG AGTACCTGGC GGTGCAGACG CTGGTCGACC GCCTCAAGGG GCCGATCATC
TGCCTGGTCG GCCCTCCCGG CGTGGGCAAG ACCTCGCTGG CGCGCTCGAT CGCGCGCGCC
ACGGGCCGCA AGTTCGTGCG CCAGTCGCTC GGCGGCGTGC GCGACGAGGC CGAGATCCGC
GGCCACCGGC GCACCTATAT CGGCGCGCTG CCGGGCAAGG TCCTGCAGTC GCTCAAGAAG
GTCGGGACCA ACAACCCGGT GTTCCTGCTC GACGAGATCG ACAAGATGTC CCAGGACTTC
CGCGGCGACC CGGCCTCGGC GCTGCTCGAG GTGCTCGACC CCGAGCAAAA CGATACCTTC
AACGATCACT ATCTCGATCT GGATTACGAC CTGAGTGATG TCATGTTCAT CACCACGGCC
AACACCTGGC ACCAGATCCC GCTGCCGCTG CAGGATCGCC TCGAGATCAT CGAGCTGCCC
GGTTATACCG AGTGGGAAAA GATCGCCATC TCGAATCAGT ATCTGATTCC CAAGCAGCGC
GAGGCCAACG GCATCCAGGA CCTCGAGGTC AACTTCACCG AGGAGTCGCT GCAGACGATC
ATCCACCGCT ACACCAAAGA GGCCGGTGTG CGTAACCTCG AGCGCGAGCT GGCCACCTGC
TGCCGCAAGC TGGCCAAGGA CTGGCTCACG CACAAGAAGC CCAAGAAGAA GGCCTACGAG
GTCACGCCCG AGCTCTTGCA GAGCTATCTC GGGGTCGAGA AGTTCCGCGC CAACAAGCGC
GAAGAGGCCA ACGACATCGG CCTGGCCAAC GGCCTGGCGG TCACCTCGCA CGGCGGCGAT
CTGCTGCCGG CCGAGGTCGC CGTCATGCCC GGCAAGGGCA AGCTCACGCT CACCGGCAAG
CTCGGCGACG TGATGCAGGA GTCGGCCCAG GCGGCCATGA GCTACATCCG CTCGCGGGCC
CTGAGCCTCG GCCTCACCCA CGACTTCCAG ACCAAGATCG ACGGCCACGT GCACTTCCCC
GAGGGCGCGA TCCCCAAGGA CGGCCCCTCG GCCGGTATCA CCATGGCCAC GGCCATCGCC
TCGGCCCTGC TGCGCATCCC GGTGCGCCAG GATCTGGCCA TGACCGGCGA GATCACGCTG
CGCGGCCGCG TGCTGCCCGT GGGCGGCATC AAGGAGAAGA TCCTGGCCGC ACACCGCGCC
GAGATCCTCG AGGTGCTGAT CCCGCACGAG AACGAGAAAG ACCTCAAGGA TATCCCCGAG
AAGGTCATGG AGCAGATGAC CATCCACCCG GTGCGGCACA TGGACGAGGT GCTCAAGCTG
GCGCTGGCGC ACGACGATCC CGACAGCTTC CTGGTGGAGC CCACCGAGGT CATCGACTGG
CGCCTGAGCG GCGGCAACGA CGACTCGACG ACGCCGCCCA AGGGCACGGT GGTCGACCGT
CAATCGGCTC ATTGA
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| Protein sequence | MFFKNDKDES DEGTPTRSLP LLPLRDIIVF PHMVVPLFVG REKSINALEE AMEADKELLL
AAQKKAKTND PREDDIFSVG TVGHIIQLLR LPDGTVKVLV EGKQRARILG YEQTSPFFLA
EVQEIAEPDE RTVEMQALMR SIQTVFENYV KLNKRIPPEF LVSVQTIEDP ARLADTIVAQ
VSLKLKDKQE ILETVSPAKR LERLYELMQA EIEILQVEKK IRTRVKKQME KSQKEYYLNE
QMQAIQKELG DRDEFKNELN DLEQKIKQKR MSLEARERCL KEFKKLKMMS PMSAEATVVR
NYIDWVLALP WDEKSDDRTD IIEAEKILEA DHYGLNKVKE RILEYLAVQT LVDRLKGPII
CLVGPPGVGK TSLARSIARA TGRKFVRQSL GGVRDEAEIR GHRRTYIGAL PGKVLQSLKK
VGTNNPVFLL DEIDKMSQDF RGDPASALLE VLDPEQNDTF NDHYLDLDYD LSDVMFITTA
NTWHQIPLPL QDRLEIIELP GYTEWEKIAI SNQYLIPKQR EANGIQDLEV NFTEESLQTI
IHRYTKEAGV RNLERELATC CRKLAKDWLT HKKPKKKAYE VTPELLQSYL GVEKFRANKR
EEANDIGLAN GLAVTSHGGD LLPAEVAVMP GKGKLTLTGK LGDVMQESAQ AAMSYIRSRA
LSLGLTHDFQ TKIDGHVHFP EGAIPKDGPS AGITMATAIA SALLRIPVRQ DLAMTGEITL
RGRVLPVGGI KEKILAAHRA EILEVLIPHE NEKDLKDIPE KVMEQMTIHP VRHMDEVLKL
ALAHDDPDSF LVEPTEVIDW RLSGGNDDST TPPKGTVVDR QSAH
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