| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4986 |
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| Symbol | |
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| ID | 8547394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6872924 |
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| End bp | 6874192 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 646389660 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
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| Protein accession | YP_003269368 |
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| Protein GI | 262198159 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.244142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.534035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCG AAAAGCGAGA CAGTGGCCAA GCCAACCTCA CCTGCTCCTT CTGCGGTAAG
TCGCAGAAGG AAGTGAAGAA ACTCATCGCC GGCCCCACTG TCTACATCTG TGACGAGTGC
ATCGGGCTGT GCAATGACAT CATCGCCGAG GAGATCGAGA AGGAAGATCA GGCCTACGGA
ACGGCCACGA TCCCCAAGCC CCAGCACATC AAGAAGATCC TCGACGAGTA CGTGATCGGT
CAGGAGCGCG CCAAGAAGAT CTTGGCGGTG GCGGTGCACA ACCACTACAA GCGCATCGAT
CACAAGGCCG GCGACGACGA GGAAGAGGTC GAGCTGCAGA AGTCGAACAT CCTGCTGCTC
GGCCCCACCG GCTCGGGCAA GACCTTGCTG GCGCAGACCC TGGCGCGCAT CCTCAATGTG
CCCTTCGCCA TCGCCGACGC CACCAACCTC ACCGAGGCCG GCTACGTCGG CGAGGACGTC
GAGAACATCA TCGTGAGCCT GCTGCAGAAC GCCGATCACG ACATCGAGCG GGCGCAGCGC
GGCATCGTGT ACATCGACGA GATCGACAAG ATCGCGCGCA AGAGCGACAA CCCGTCGATC
ACGCGCGATG TGAGCGGCGA GGGTGTGCAG CAGGCGCTGC TCAAGATCAT CGAGGGCACG
CTGGCCGCGG TGCCGCCCAA GGGCGGTCGC AAGCACCCGC AGCAGGAGTT TCTGCAGGTC
GATACCTCGA ACATCCTGTT CATCTGCGGC GGCGCGTTCA CGGGTCTCGA GGAGATCATC
GAGAACCGCA TCGGCCAGCG CATGATCGGC TTCGGCGCCA CGATGAAGCC CAAGAAGGCG
CTCGACCGCT GGGAGCTGAT CAAAGAGGTG CAGCCCGAGG ATCTGCTCAA GTACGGCATG
ATCCCCGAGT TCGTCGGCCG CCTGCCGATG ATCGCGCCGC TGCACGAGCT GTCTGAGGAC
GCCCTGGTGC AGATCCTTAC CCAGCCCAAG AACGCGCTGA TCAAGCAGTA TCAGAAGCTG
TTCGAGATGG ACGGGGTGAA GCTCAAGTTC ACCCACGGCG CGCTGTACAA GATCGCGTCG
CTGGCCCAGG CGCAGAAGAG CGGCGCCCGC GGTCTGCGCG CCATCCTCGA GTCGGCGTTG
CTCGACATCA TGTACGACAC CCCCAGCCAG CACAACATCA GCGAAGTGAT CATCAACGAG
GACGTGGTCG AGAAGCACTC CGAGCCGATG GTTACCTACG TCAAAGAGCC GGCCGTAGAG
TCGGCCTAA
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| Protein sequence | MPSEKRDSGQ ANLTCSFCGK SQKEVKKLIA GPTVYICDEC IGLCNDIIAE EIEKEDQAYG
TATIPKPQHI KKILDEYVIG QERAKKILAV AVHNHYKRID HKAGDDEEEV ELQKSNILLL
GPTGSGKTLL AQTLARILNV PFAIADATNL TEAGYVGEDV ENIIVSLLQN ADHDIERAQR
GIVYIDEIDK IARKSDNPSI TRDVSGEGVQ QALLKIIEGT LAAVPPKGGR KHPQQEFLQV
DTSNILFICG GAFTGLEEII ENRIGQRMIG FGATMKPKKA LDRWELIKEV QPEDLLKYGM
IPEFVGRLPM IAPLHELSED ALVQILTQPK NALIKQYQKL FEMDGVKLKF THGALYKIAS
LAQAQKSGAR GLRAILESAL LDIMYDTPSQ HNISEVIINE DVVEKHSEPM VTYVKEPAVE
SA
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