Gene Hoch_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4980 
Symbol 
ID8547388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6865561 
End bp6866640 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content73% 
IMG OID646389654 
Producthypothetical protein 
Protein accessionYP_003269362 
Protein GI262198153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.514194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.555193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTCG CCACGGATGG GAAGATAGAT GCGCGCTCGT TGGTTTGTTC GTCGCTCGCG 
CGGTGGGTCG GTGAAAGCGA CAGCGCGGCG GCGCGGTCCG AGGGCGATGA GGTAGGAGCG
CAGGCGGACG CGGCGAGCGA GCGCGCCGAG CCCGCGCCCG AGCGCGCATA CAACCGCGGC
GTGCCGATGG CGCGGCGGGT CGAGGCGCGG GCGCTGTTCA AGGAGGGCAA CCGGCTCATG
TCCGTGCCCT CGTTCCTGCA AGCCGCGCGC AAGTACCAGG CCGCGCTGGC GCTGTATCGC
CATCCGGTCT TCTACTTCAA TCTGGCCCTG GCGCAGTTCA ACTTGGTGCA GCCGGTCGAG
TCCTACGAGC ACTTCGGGGC GGCCATGGCC TACGGCCCCG AGGTGCTCGG CGAGCTGTCG
TATCAGCGCG CGCAGCAGTA CCGCCGCCGC CTGGCCGAGC AGCTCGCTCG GGTCGAGGTG
GCGTGCGCCC AGGCCGGCGC CGAGGTCACG CTCGACGGCC GGGTGCTGTT CATCGGCCCC
GGACGCTACG AGGGCATGGT CACGCCCGGC GCCCACCAGC TCGTGGCCAG CAGAGCCGGC
TTCGTGCCCG AGACCGAGCG CCTGGTCCTG TCCGCGGGCG AACACCGGCA GGTCGAGCTG
TCGCTGGCTC GCCCAGAGCG CGTGCTCGCG GTGCGGCGCT GGCCGGTGTG GCGCCCATGG
GCCGTGGTCG TGGGCGGCGC CGCGGCGCTG GCGGTGGCTG GCGCGCTCGA CTGGCAGGGC
GATCGCGTCC TGGCCGATTA CGATGCCGCC GTGGCCGCGC GCTGCTCGGG CGAGGACGGC
TGCGAGACCG CGTCCCTGGC CGCCGAGCTG CGCGCCGAGC GCGCCCGCGG GCTGAGCTTC
GACCGCCGCG CGACCGTGGT CTACGCGCTC GGCGCCACCG CGATCGCGAG CGGCGCTGTG
CTGCTGTTTC TCAACCGCGA GCGCACCCTG CGCTTGCCGG GCGAGCGCGA ACCCGCCGTG
CGCCTCACGC CGCAGGTGTC TGGCGATGGC GTGGCAATGA CGCTCTCGGG GAGGTTTTAG
 
Protein sequence
MYVATDGKID ARSLVCSSLA RWVGESDSAA ARSEGDEVGA QADAASERAE PAPERAYNRG 
VPMARRVEAR ALFKEGNRLM SVPSFLQAAR KYQAALALYR HPVFYFNLAL AQFNLVQPVE
SYEHFGAAMA YGPEVLGELS YQRAQQYRRR LAEQLARVEV ACAQAGAEVT LDGRVLFIGP
GRYEGMVTPG AHQLVASRAG FVPETERLVL SAGEHRQVEL SLARPERVLA VRRWPVWRPW
AVVVGGAAAL AVAGALDWQG DRVLADYDAA VAARCSGEDG CETASLAAEL RAERARGLSF
DRRATVVYAL GATAIASGAV LLFLNRERTL RLPGEREPAV RLTPQVSGDG VAMTLSGRF