| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4963 |
|---|
| Symbol | |
|---|
| ID | 8547371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 6843262 |
|---|
| End bp | 6844848 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646389637 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003269345 |
|---|
| Protein GI | 262198136 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.435049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACG GGAACACCAC CGGCGCACGC TCGCGCCCGC AGCCGGCGGC GACATCGAGC
CTGAGCCGCG CGGCTTTCGT GCTAGCGTCG CAGATGATGC CTCTGCAAGA GCTTCGGTCT
GCACCGGATG AGGCGCACGG GCACCGCCAT CGGCACGGGC GCCACTCGCT GTCGCTCGCG
TGCATCGGCT TGAGCTTGGC GCTCGGCGCG TTCGCCTGCG GCGGCGACGG GTTGCCCTGG
CAGGCGGAGC GGGCCGCGGA CGCGCGCGAG CTCGAGATTC TCATGTCCGT GCCCGTGGAC
CGTCTCACCC GCGAGGAATA CGCGGCCCAG GCCGCGGAAC AGGCGGAGAC GGTCAGCGAC
GACTACTTCG CCTACTACGC CAACACCTAC GGCCGCCTGG GTTTCTTCGA CACCGAGCTC
GACCTGCGCC CGGTGTTTAC GGCCTCGCGT TCCGACTTCG TGGGCGCGAC CTATTCGCCC
GAGGACCAGC GCATCACCCT GGTCGGCGAC GCGCCCGACT CGACCTTTGT CCACGAGTGG
GTGCACGCGC TGCAGGACCA GCACTTCGGG CTGATCGCGT ACGATGATCT CAGCACCTCG
GACGGGTTTC TCGCCCGCCG CGCGGTGGTC GAGGGCGACG CGGTGCTGGC GACCTATCGC
TTCGAGAGCC TGCTGCGCGG GCTCGATCTC GACGCCATCG ACTGGCGTCC GACCTGGGAG
GGCTGGCTCG GGTTCAGCGA CGAGATCGTG GCCGAGGTCG AGTACCCGCT CATCTTCGTC
GACTACGTCA CCTTCGTGTA TCCGTACGGG CTGTCGTTTT CCGGGCACAA CCTGCTGGGC
ATCCGCCTGG GCGAGACGGG CGAGGAATCG CCGCCGCCGC CGCCCTACGA CTGGAGCTTG
CAGGACGAGC TGTTCACGAC CCGGCCGCCG CAGAGCACCA AGGCGGTGTT GTTGCTGGAC
GTGCTCGGCG ACGAGCTGGC TCCGGTGAAT GATATCGGTC TCGGACAAGT GCCCGAAGAA
CTGGCCGAGA CCTGGATGCT CTGGGACTGG GATCGCCTGG GGATGTGGTA CGTGCACCTG
CTGCTGCATC CGCTCGAGCT CGGCGGCGAG CTGGCCGACT CGCTGGCGCT GGCCCGGGCC
TGGAACGGCG ATCGCGCCGA TTTTTTGCGG GCCCCGGACA GCGACGAGGT GGCCGTGGTG
TGGGCCACTG CGTGGACCTC CGAGGCCGCG GCGACGGAGT TTGCAGCGGC ACTGAGCGCG
CTACACGGTT TCGCGGCCGT CCCCGACCCG GAGGGCGATC CCGAGGCAGA GGACGGGCCG
GCCGGGACCG CGGCCGATGG CGAGGCCATG TGGCTCGAGC AGCGCGGCGA GCGGGTGGTG
CTGGTCAAGA ACCTGCCCCC GGGCCAGGCC TCCGCGGCCG CGGATGGCGC GTTCTTCGGG
GCTTCGCTGT CCACGGCGCG CCGGCACGGC TCGCTGGCCG CGCAGCTCGA ACGCCTGCGC
AGCGTGCGCG CCGGCGCGGT GCGCTGTCCG TTCGTCGACC CGGCTCTGCG TGTACGGGAA
GGCATGGACG CTGCACGCGG GCTTTGA
|
|---|
| Protein sequence | MSHGNTTGAR SRPQPAATSS LSRAAFVLAS QMMPLQELRS APDEAHGHRH RHGRHSLSLA
CIGLSLALGA FACGGDGLPW QAERAADARE LEILMSVPVD RLTREEYAAQ AAEQAETVSD
DYFAYYANTY GRLGFFDTEL DLRPVFTASR SDFVGATYSP EDQRITLVGD APDSTFVHEW
VHALQDQHFG LIAYDDLSTS DGFLARRAVV EGDAVLATYR FESLLRGLDL DAIDWRPTWE
GWLGFSDEIV AEVEYPLIFV DYVTFVYPYG LSFSGHNLLG IRLGETGEES PPPPPYDWSL
QDELFTTRPP QSTKAVLLLD VLGDELAPVN DIGLGQVPEE LAETWMLWDW DRLGMWYVHL
LLHPLELGGE LADSLALARA WNGDRADFLR APDSDEVAVV WATAWTSEAA ATEFAAALSA
LHGFAAVPDP EGDPEAEDGP AGTAADGEAM WLEQRGERVV LVKNLPPGQA SAAADGAFFG
ASLSTARRHG SLAAQLERLR SVRAGAVRCP FVDPALRVRE GMDAARGL
|
|---|
| |