Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4953 |
Symbol | |
ID | 8547361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 6827807 |
End bp | 6828916 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646389627 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003269335 |
Protein GI | 262198126 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAAC GCATCGAGCT CGCGCCCCTG GTGGTCGACG CGAGCACCGA CATGGGCACG CGCAGCCACC TCGACGCCGC CGGCGAGCCG CGCATCATCG TGCGCCGCTT CGTGGTCGAC GAGGACTCGG CCGGCTTTCG CCTCGACCAC TACCTCAAGC GGCAGATCCC GCGGCTGTCG CGCACCAAGC TGCAGGACGT CATCCGCCAT CAGCTCGAAC CAGTGCGCGG GCGCCAGCTC AAGCCCAGCG CCAGCGTGCA CAGCGGCGAC GTCATCGTCA TGAGCCGCCG CGCCCGGCCC GAGCCGCCGT GCCCGCGCAC CATCGGCGTG CTGTACAGCG ATCCGCACAT GCTGGTCATC GACAAACCGG CCGGGCTGCC GGTGCACGCC TCGGCGCGCT TCTACTTCAA CACCCTCACC CGCGTGCTCG GCGAGCGCTT TCCCGGCCAG CCCATGCAGA TCTGCCATCG CCTCGACCGC GAGACCTCGG GCGCGCTGGT GGTCGCCCGC GGCAAACCCG AGGCCGCGCG GCTCAAGGGC GCGTTCGCCG ACAAGCGGGC GCACAAGACC TATCTCGCGC TGGTCTGGGG CGATCCCCCG TGGCCCGACG GCGCCTGGGA CAGCGCGCCC GAGGACGACG CGATCATCGA CTTGCCGCTG GGTCTGGTCG CGGACGAGAG CGCGCGCATC AAGATCCGCA TGGAGGTGCG CGCCGGCGCC CTGCCCTCGC TCACCCGGGT GCGCGTGCTC GAGCGCCGCG GCCGCGCCGC CCTGGTGCGC TGTCTGCCGC TGACCGGACG CCAGCACCAG ATCCGCGCGC ATCTGGCCGC GTGCGGCCAT CCCATCGTCG GCGACAAGCT CTACGCCCAC GGCGACGATG TCTTTGCCGC CTACTGCGAC CGCGGCATGA CCCCCGAGCT CTTGGAGCGC GTGCGCCTGC CGCGCCAGGC GCTGCACGCG GCCGCGATCG CGCTGCCGCA CCCATTCGAG GGCCGTCAGG TGCGCGCCGA GAGCCCGCTG CCCGCCGATA TGCGCGCGTT TCTCGACCGC GCGGACGCCG AAAGCATGCC GGCGCTGTGC GCGCGCGCGA GCGGCGCGGA GCTGTGCTAA
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Protein sequence | MAERIELAPL VVDASTDMGT RSHLDAAGEP RIIVRRFVVD EDSAGFRLDH YLKRQIPRLS RTKLQDVIRH QLEPVRGRQL KPSASVHSGD VIVMSRRARP EPPCPRTIGV LYSDPHMLVI DKPAGLPVHA SARFYFNTLT RVLGERFPGQ PMQICHRLDR ETSGALVVAR GKPEAARLKG AFADKRAHKT YLALVWGDPP WPDGAWDSAP EDDAIIDLPL GLVADESARI KIRMEVRAGA LPSLTRVRVL ERRGRAALVR CLPLTGRQHQ IRAHLAACGH PIVGDKLYAH GDDVFAAYCD RGMTPELLER VRLPRQALHA AAIALPHPFE GRQVRAESPL PADMRAFLDR ADAESMPALC ARASGAELC
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