| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4944 |
|---|
| Symbol | |
|---|
| ID | 8547352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 6818853 |
|---|
| End bp | 6820406 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646389618 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_003269326 |
|---|
| Protein GI | 262198117 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.141691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TGGCCAGTTA CGTCAACGAG CGCTGGGTGG AGGGCACGGG CTCGGCCCAG
CCGCTGCACA ATCCGGCTAC CGAAGAGATC CTTGCCGAGA CCTCGACCGA GGGCGTCGAT
TTCGCGGCCG CGATGACGCA CGCGCGCGAG CGCGGCGGCC CGGCCCTGCG CGCGCTCAGC
TTTGCCCAGC GCGGCGAGAT CCTGCGCGCC ATGGCAAAGA CCATCCACGA CAACCGCGAG
GAGCTGATCG CGCTGGCCAT CGAGAACGGC GGCAACACCC GCGGCGACGC CAAGTTCGAC
ATCGACGGCG CCAGCGCCAC CCTGGCCGCG TACGGCGAGC TCGGCGCCGA GATCGGCGAC
ACCCAGGTGA TGGTCGACGG CGACCCGGTG CAGATCGGGC GCACGGCGCG CTATCAGGGC
ATGCACCTCT GCGTGCCCCG GCGCGGCGTG GCCGTACACA TCAACGCGTT CAACTTCCCC
GCCTGGGGCA TGTGCGAAAA GGCCGCGACC GCGCTGCTCG CCGGCATGCC GGTGGTCAGC
AAGCCGGCCT CGACCTCGGC CATGGTCGCG CATCGCACCA TGGAGCTGTT CGTCGCGGCC
AAGCTCTTGC CCGAGGGCGC GCTGTCGTTC ATCGCCGGTC AGCCCGGCGA CCTGCTCGCG
CATCTCCAGG GCCAGGACGT GTTGGCCTTC ACCGGCTCGA GCGGGACCGC GCGCACGCTG
CGCGGGCTGG GCAGCGTCAT CGACAACTCG GTGCACGTCA ACGTCGAGGC CGACAGCCTC
AACGCCGCCG TGCTCGCGCC GGATGTCGAC CCATCGTCCG AAACCTTCCA GCTCTTCCTC
GCCGACATAA GCCGCGATAT CACACAAAAG GCCGGGCAGA AGTGCACGGC CATCCGCCGC
ATCTTCGTCG CCGAGGCCCT GGCCGAGCGC GCGGCCGAGG CCCTGGTCGA GCGCCTGGCC
GGCACGGTGG TCGGCGATCC GGCCGACAAG AGCGTGCGTA TGGGGCCGCT GGCCTCGGCC
GCGCAGCAGC GCGACGTGCG CGCCGGGATC GAGCGCCTGG CCGGGCAGAC CGAGGCCCTG
TTCGGCGGCG ACGGCGCCTG CGAGCCGGTC GGCGTACCCG CGGGCAAGGG CTACTTCGTC
GGCCCGGTGT TGCGCCGCGC CAGCGACGCG CGCGCGGCCA CGGCGGTGCA CGATCACGAG
GTCTTCGGCC CGGTGGCCAC GCTCCTGCCC TTTGCCGGCG GCGCCGAGGA GGCGGCCGAG
CTGGTCGCGC TGGGCGGCGG CGGGCTGGTG GCCTCGGCGT ACACCGACGA GCGCGACTAC
GCGCGCGACA TCATCCTCGG CCTGGCGCCC TACAACGGCC GCGTGTACCT CGGCAGCAAC
AAGATGGCGG CGCAGTCCAT GGGCCCGGGC ACGGTGTTGC CGCAGCTCGT GCACGGCGGC
CCGGGGCGCG CCGGCGGCGG CGAGGAGCTG GGCGGCCGCC GCGGCATGGC GCTGTATCAG
CAGCGCACCG CGGTGCAGGG CGACAAGGGC ATGCTCAAGA CCTTCGAGCG CTGA
|
|---|
| Protein sequence | MKKLASYVNE RWVEGTGSAQ PLHNPATEEI LAETSTEGVD FAAAMTHARE RGGPALRALS
FAQRGEILRA MAKTIHDNRE ELIALAIENG GNTRGDAKFD IDGASATLAA YGELGAEIGD
TQVMVDGDPV QIGRTARYQG MHLCVPRRGV AVHINAFNFP AWGMCEKAAT ALLAGMPVVS
KPASTSAMVA HRTMELFVAA KLLPEGALSF IAGQPGDLLA HLQGQDVLAF TGSSGTARTL
RGLGSVIDNS VHVNVEADSL NAAVLAPDVD PSSETFQLFL ADISRDITQK AGQKCTAIRR
IFVAEALAER AAEALVERLA GTVVGDPADK SVRMGPLASA AQQRDVRAGI ERLAGQTEAL
FGGDGACEPV GVPAGKGYFV GPVLRRASDA RAATAVHDHE VFGPVATLLP FAGGAEEAAE
LVALGGGGLV ASAYTDERDY ARDIILGLAP YNGRVYLGSN KMAAQSMGPG TVLPQLVHGG
PGRAGGGEEL GGRRGMALYQ QRTAVQGDKG MLKTFER
|
|---|
| |