Gene Hoch_4906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4906 
Symbol 
ID8547313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6778617 
End bp6780242 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content69% 
IMG OID646389579 
Productserine/threonine protein kinase 
Protein accessionYP_003269288 
Protein GI262198079 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAT CGAAGCTCGG ACAGATACCG GATCCCCTGG AGGTGGGCGC GCGCCTCATG 
GATCGCTACT GCATCCTGGA GCGGGTGAGC GCGGGCGGTC ACAGCGTGGT CTACCGCGGC
GAGGACGAGC GCCTGCATCG GCCGGTGTGC ATCAAAGTCT TTCACCGGGT CAAATCCTTC
GACGGCCCGT ACAAGACCGC CTACGAGCAT TTTGTGCAGG AGGCCTTTGC GCTCTCCAAG
CTCACCCACC CCAACACCCT GCGCATCTAC GACTTCGGCC ACCTCGAGAA GAGCGACGCC
GAGGGCGGCT CGGGCGCGCC CTTCCAGGTG TCGGAGTTCA TGACCGACGG CACCTTGTGG
AGCCAGGTGC GGGCCAAGGG ACCGATGGGC GCCGTCGAGT CGGCCCGCAT CGCGACCGCG
CTGGGCGGCG CGCTCGGCGA GGCCCACGAG TCGGGCATCA TCCATCGCGA CATCAAGCCG
CACAACATCC TGTTCACCGC GGCAGGGCGA TCGCTGGTGG TCAAGCTCGC CGACTTCGGC
ATCGCCAAGG CGCTGCCCAC CGAGGCCGCC GACTTGCGCA ACCGCGCCGA CGACACCTCG
GTCGTGGTCG GTCGGCCGTT TCTCATGTAC TCGCCGTGGT GGGCGGCGCC CGAGCAGCTC
GCCGGGATGC CGGTCGGCAC CGAGGCCGAC GTCTTCGCCC TGGCGCTGTC GATCATCTAC
ATGGTCACGG GCAACGTGGT GTTTCGCGAG AACGATCCCA TCAAGGCCTA CGAGCAGCGC
AAGTCGGGGC CGGCCTTTGT CGAGGCGGCC TGCGTCGGCG CCGGACTGTC GCACGCGGTC
ATCGACCTGC TGGCCCGCGC GTGTCGCTTC GAGGCCGACG AGCGCTTCAA CGACGCCGAG
ACCTTTGCCC TCGAGCTCGC CGCCGGCCTG CGCAAGCCCG GACCCACGGC GCAGATCTCA
TCCGTACCCG AGCCGCGCGC GCCGCAGCAT CGGACCTCGG ACCGCTACGC CACCGACGTC
GAGCCGCACG AGCAGGCCAC GAACGAGTCC TCCGGGCCCA TGCCCGAGCA GCAGCCGCCG
CCCTATCTGC AGCCGGTGCC GCCACCGGCC GAGCCCGGCT GGCCCGAAGC GGCGCGCTCG
GCGCCGCCGC CGCAGCGTCT GCACGTGAGC GAGCAGCCGC AGTTTGCGGC CGAGCGCCGG
ATTCACTTCG TGCCCGCGCC GCAGGGTGAG GCCACGGTGA GCTGCCTCGA CAACCGCGCC
CGCCTGCGCA TCGCCTTCGT CCCCGGGGCC AGCGGCCTGT GCGTGCACCT GCGCGGGCTC
ACCTGTTTCC TCGCGCCCGA GGGCGGACGG CCATCGAGCG CCATGCTGTT CGAGAACGAC
GGGTTTGGCT ATCTCGTGCA ACCCAACCGC CAACCCCTGG GCGGCGTCTT CGTCAGCCAG
GGCAAAGCCG CCGCCGGGCA TCGCGTGTTT TCCTTCGATA ATCAGTCCGT GGCGGTGAGC
GTCGACGAGT GCCCGCAGGT GGTGGCCATC GACTTCGGAC CGGGGAGCGA CTGCTTCCTC
ATCCACCTGC CCGGGCAAGC GAGCATGGAT CCACGTCGAA CCAAGAAGGC TTCCGCACGG
TTCTGA
 
Protein sequence
MSKSKLGQIP DPLEVGARLM DRYCILERVS AGGHSVVYRG EDERLHRPVC IKVFHRVKSF 
DGPYKTAYEH FVQEAFALSK LTHPNTLRIY DFGHLEKSDA EGGSGAPFQV SEFMTDGTLW
SQVRAKGPMG AVESARIATA LGGALGEAHE SGIIHRDIKP HNILFTAAGR SLVVKLADFG
IAKALPTEAA DLRNRADDTS VVVGRPFLMY SPWWAAPEQL AGMPVGTEAD VFALALSIIY
MVTGNVVFRE NDPIKAYEQR KSGPAFVEAA CVGAGLSHAV IDLLARACRF EADERFNDAE
TFALELAAGL RKPGPTAQIS SVPEPRAPQH RTSDRYATDV EPHEQATNES SGPMPEQQPP
PYLQPVPPPA EPGWPEAARS APPPQRLHVS EQPQFAAERR IHFVPAPQGE ATVSCLDNRA
RLRIAFVPGA SGLCVHLRGL TCFLAPEGGR PSSAMLFEND GFGYLVQPNR QPLGGVFVSQ
GKAAAGHRVF SFDNQSVAVS VDECPQVVAI DFGPGSDCFL IHLPGQASMD PRRTKKASAR
F