| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4874 |
|---|
| Symbol | |
|---|
| ID | 8547281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 6730141 |
|---|
| End bp | 6731190 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646389547 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_003269256 |
|---|
| Protein GI | 262198047 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.165645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.245962 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCG CGCGCTCGAG CGCCCGCGCG TTGCTGCTGG CCGCCGTTGC CTGTGCGGGC
CTGGCGACGC CGGCCCTGGC CCAGCAACTC CAGGGGGACA AGGGCCCCGC GGTGGGCGGC
GGTGAGAAGC GCGCGACGCG CACCGCCCTG GTGCTCGATC GGGTCGCGGC TGTGGTCAAC
GACTCGGTGA TCCTCACCAG CGAGCTCGAT GCCCGCCTGG CCCCGCTGAC CGCCGGTCTG
GCCAATATCA ACGATGAGCG CGAGCGCGCG CGCCGAGGCG AACAGCTCCG CTCCCAGCAA
CTCGACGAGA TGATCTCCGA GGAGCTGGTG GTGCAGGAGG CGCGCAAGTC CAAGCTCAAC
GTGGACGACA AAGAGGTGTC GGCGGCGCTG GCTGAGATCA AGCAGCAGAA CGGCCTCGAC
GACACCCAGC TCGCCGCCGC GCTGGCGCAG CAGGGCTACA GCATGCAGGC CTACCGCAAG
GAGGTCGAGC GCCAGCTTTT GCACCGGCGC GCGATCAACA TGCTGGTGCG GCCGCGGGTC
ACGGTGACCG ACGAGGACGT GCGCGTCCGC TACGACACCA TGAGCCGGCG CTCGGCCGCG
GTGAGCAAGG TGCGGCTCAA GCACGCGCTG CTGTCGCTGC CGCCCAATCC CAGCAACGAG
CTGCTCGCCG AGGCCAAGAG CAAGGCCGCC GCCATCGTCG AGGCGGTGCG CGGCGGGGCG
TCCTTCGACG ACCAGGCTCG GCAGTACTCG GACGATATCA ACACCCGCGA CAGCGGCGGC
GACCTGGGCT GGATCGAGCG CGGCAGCATC GCGACCGAGT GGGAGGTCAT CGTGTTCTCG
ATGGAGGAGG GCGAGGTGCG CGGCCCGGTC AGCGGTCCGG GCGGCCTGCA CGTGTTCTAC
GTCGAGGAGC TGGCCAAGAG CGATCTCGAG GAGTTCGACG CGGTCAAGGA GCAACTCCAG
AGCGAGATCT ATCGCGAGGA GATGGACAAA GAGATCACGG CGTGGCTGCA AGAGCTGCGC
GACAAAGCGT TCATCGATCG CAAGATCTGA
|
|---|
| Protein sequence | MPRARSSARA LLLAAVACAG LATPALAQQL QGDKGPAVGG GEKRATRTAL VLDRVAAVVN
DSVILTSELD ARLAPLTAGL ANINDERERA RRGEQLRSQQ LDEMISEELV VQEARKSKLN
VDDKEVSAAL AEIKQQNGLD DTQLAAALAQ QGYSMQAYRK EVERQLLHRR AINMLVRPRV
TVTDEDVRVR YDTMSRRSAA VSKVRLKHAL LSLPPNPSNE LLAEAKSKAA AIVEAVRGGA
SFDDQARQYS DDINTRDSGG DLGWIERGSI ATEWEVIVFS MEEGEVRGPV SGPGGLHVFY
VEELAKSDLE EFDAVKEQLQ SEIYREEMDK EITAWLQELR DKAFIDRKI
|
|---|
| |