| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4863 |
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| Symbol | |
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| ID | 8547270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6714163 |
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| End bp | 6715509 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646389536 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003269245 |
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| Protein GI | 262198036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.298467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA GCACCCCCGG CTGGAAAACC ACCGCGCTCT TGTGCGCGCT CATCCTGGCA
GGCGCCGCGG CCATCGCCGC GCTCACCTTC TTGACAGAAC CCAGCGCCCA GCGCTCGGGC
GCCACCAAGG AGACGGCCAT GCTGGTCGAG GTCGCCACAG TCGAGCTCGG CAGCTTCCGC
CCGGTGCTGG TGGCCACGGG CACGGTCGAG GCGGCCCGCG ACATCACCTT GCGCCCTCAG
GTGAGCGGCA CGATCGTGGC CCGCGCGCCC GGGTTCGTGC CGGGCGGCTT CGTGCGCAAG
GGCGAGCTGC TGCTGCGCAT CGACGCGGCC GACTACCGCA ACCTGCTGCA GCAGCGGCAG
AGCGAGCTGA GCCAGGCGCT CGCCGATCTC GCGGTGGAGA TGGGCCGCCA AAACGTCGCC
CGCCAGGATT TCGAGCTGCT CGCCGAGACC CTGCCGGGCG AGACTCTGGG GCCGGAGAAG
CAGGCGCTGG TGCTGCGCAA ACCGCAGCTC GAGGCTGCCG AGATGCGGGT CGAAGCGGCG
CGGGCCGCGG TCGCCCAGGC GCGTCTCGAT CTCCAACGGA CGTCCATCGA GGCGCCCTTT
GACGCGCACA TCCTCCGCCG CGAGGTCAAC GTCGGCTCGC GGGTGACGCC GCAGGATGCT
CTCGGACGCC TGGTCGGCCT CGACCTGTAC TGGGTCAACG TGACCCTGCC GCTGTCCAAG
CTGCCGTGGA TCGCGATCCC CGAGGGCTAT AGCGACGGCG ATAGCGACGG CGACGGCGAC
GGCGACAGCG CGCGCGCGGC CGAGGTGAGA GTGCGCAACC GCGCTACCTG GCCTGCCGAT
GTGTATCGCA TCGGACAGGT GTCCAAACTC ATCGGCGCGC TCGATGAGGA CACGCGCATG
GCCCGCGTGC TGATCGCCAT CCGCGATCCC CTGGCCCGCG GCGAAAAACG CGGCAAAAAA
CGCGGCGAAG AACGCGGCGA CGAGGTCCCG GCGCTGATAG TCGGCGAGTT CCTCGAGGTA
CACATCGAGG GCGAGGAGCT GAGCGACGTG GTCCGGGTCG AGCGCGACTA CCTCCGCGAC
GGCGACACGG TGTGGGTCAT GGAGGGCGAT GAGCTGCGCA TCCGCAAGCT CGATATCGTG
CTCAGCGACG CAAACTACGC GTACGTACGC GAGGGTCTGG CCGACGACGC AAAGATCGTC
ACCACCAACC TGTCCACGGT CACCGATGGC GCCAAGCTGC GGCTCGCCGA GGACGCAGTC
GAGGCCGGGG ACGCGGACGA AAACGAAAAC GCGGACGAAA ACGAAAACGC GGACGCGGGC
GCCAGCGCCG GGGGCGAGAC GCGATGA
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| Protein sequence | MSDSTPGWKT TALLCALILA GAAAIAALTF LTEPSAQRSG ATKETAMLVE VATVELGSFR
PVLVATGTVE AARDITLRPQ VSGTIVARAP GFVPGGFVRK GELLLRIDAA DYRNLLQQRQ
SELSQALADL AVEMGRQNVA RQDFELLAET LPGETLGPEK QALVLRKPQL EAAEMRVEAA
RAAVAQARLD LQRTSIEAPF DAHILRREVN VGSRVTPQDA LGRLVGLDLY WVNVTLPLSK
LPWIAIPEGY SDGDSDGDGD GDSARAAEVR VRNRATWPAD VYRIGQVSKL IGALDEDTRM
ARVLIAIRDP LARGEKRGKK RGEERGDEVP ALIVGEFLEV HIEGEELSDV VRVERDYLRD
GDTVWVMEGD ELRIRKLDIV LSDANYAYVR EGLADDAKIV TTNLSTVTDG AKLRLAEDAV
EAGDADENEN ADENENADAG ASAGGETR
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