| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4861 |
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| Symbol | |
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| ID | 8547268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6710190 |
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| End bp | 6712253 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646389534 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003269243 |
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| Protein GI | 262198034 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0506026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATGGC AGCAGGACCG AGAGCTTGAA ACACGTCTAA CGCGGACGGC CGCGGGGGCG
CTCATCGCAC TTGGCGCGGT GGTCTTCTTC TTGGGATGGT GGGCCGACAT CACCGTCGTG
CGCACCCTGG GGCCGGGGTT GGCGTCGATG AAGGTCAACA CCGCCCTGTG CTTCATTGCC
AGCGGAGTGG CCCTGTGGCG CCTGCTGCGG CGCGAAGAGC TGGCGCGGGC GTCGCGTTTG
ACCGATGCCC TGGCCCTGTT GGTGATCGGC ATCAGCGGCT CCTCGCTGCT CGCCGATACC
TTTCATTGGT CGCTGTGGAT CGACGAGTTT CTGTTCACCG ATCCCAACCC GCGCGGCATG
CCGTGGCCCG GGCGGATGAG CCCGGCGACC GCCTTTGGGC TCACGCTCGT GGGCATGTGC
CTGCTCAGCT ATGATCGCAA GGGAATCGAG CGGGTGTGGT TGCCGCATCT GCTCGGGGCG
CTGGTCTCGC TCAACGGCTT GATCGCCGTG GTTGGTTACG CCTACGGCGT GAGCGCCCTG
TATCAAGTGC GGCCCTACGT GTCCATGGCG CTGCACACCG CCACTGCCTT CCTGCTGCTC
GGTATCGGCT TGGTGTCGGT GCCGCCGTGG CGCGGCATAC CCGGTCTGCT GCTCACCGCC
GGGTCGGACG GTCGCATGCT GCGTCGGCTG TTGCCGATTG CGCTGTTGGT GCCGCTGGTG
CTGGGCTGGA TGGCCATGCA GGGCAGCCAC AATGGTTGGT ACGGCTCGCG TTTTGGCTTT
GTGCTGGCGG CGCTGGCGAG CTCGCTGTTG CTGGTGAGCG TGGTCGGCCG CACCGGCCTG
GTGCTGGGCC GAGCCGAGCG CGCGCGTCGG CGGGCGCTGC AGCAACTGAG CGAGCAGGAA
GAGTGGCTGT CGACTACCTT GTCGAGCATT GCCGACGGCG TCATCGCCAC CGACCAGGGC
GCTCGCATCT CATTCGCCAA CCCGGCCGCG TGCGAGCTGC TCGGACGGGA CCTCGACAGC
CTGATCAAAC AACCCATCGA CGAGTGCTTC GATGTCGTGG ACACAGCGAC CGGGGAGCCC
GCCGTGTTAC CCGTCCACGC CGTATTGGCG TCGGGAAAAG CGAGCGCGTT GGAAGAGACC
TGCGAGCTGC GCCGGGACGA CGGCACACGC ATCGCCATCG CCGATGCATG CACACCCCTC
GCCGGCGCGG ACGGCGTCAT GCGCGGCGCT GTGTTGATCT TCCGCGACGT CTCGAGCGAG
CGTGCGGCGG CCGCGGCCGT GAAAAAGGCC TCCGAATACA AAGATCAGTT TTTGGCCATG
CTCGGCCACG AGCTGCGCAA TCCGCTGTCG GCGATCTGCA ACGCCACGCG CTTGCTGGAG
GTCCTGGTGC AGCACAACGA CGCCAAGCTA CAGCGACCCG TCGACGTGTT GGCGCGGCAG
AGCGAGAACC TCACCTTACT CGTCGACGAT CTGCTCGACG TCTCGCGGGT CGCCCGCGGC
AAGCTGGCGA TCGAGACGAG TCGGCTCGAC CCGCGCAGCG TGCTGCGCAA CGTCCTCGAC
GATATGCGGG TCAAGGCCGA GAATCGCTCA CTGCGCCTGT TCGCCGAGAT CGCCGGCGGT
AGCGACGACG ACCCCGGCGA CGGAGAGATG ACGATTCTGG GCGATTCTGT ACGCCTGTAC
CAGATATTTG GCAACGTCGT CGGCAACGCG ATCAAGTTCA CCGATGAGGG CGAAGTGCGG
GTATCGATGA TGCGGGAAGG GGATGAGATC GTTCTGCGCG TGAGCGACAC CGGCATGGGC
ATGACGGATG AGGAGCTGGC GCTGGTGTTC GAGCCCTTTC AGCAGGGCGA GCAGGGCTTC
CACCGCCCGC AAGGCGGGCT GGGGCTGGGG CTGAGCGTGG TCAAGGGCCT GGTGGTCCTG
CACGACGGCA CCGTCGAGGC GCACAGTGAG GGACGGGGGC AGGGCACCAC CATGACCTTG
CGCTTCCCCT GCGCGCCGGT GCGGGCGCGC ACCAATCAGC CGGTTTCGAA CTCCGAGCCA
TCGTTATCGT CATCGTCCGA GTGA
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| Protein sequence | MTWQQDRELE TRLTRTAAGA LIALGAVVFF LGWWADITVV RTLGPGLASM KVNTALCFIA
SGVALWRLLR REELARASRL TDALALLVIG ISGSSLLADT FHWSLWIDEF LFTDPNPRGM
PWPGRMSPAT AFGLTLVGMC LLSYDRKGIE RVWLPHLLGA LVSLNGLIAV VGYAYGVSAL
YQVRPYVSMA LHTATAFLLL GIGLVSVPPW RGIPGLLLTA GSDGRMLRRL LPIALLVPLV
LGWMAMQGSH NGWYGSRFGF VLAALASSLL LVSVVGRTGL VLGRAERARR RALQQLSEQE
EWLSTTLSSI ADGVIATDQG ARISFANPAA CELLGRDLDS LIKQPIDECF DVVDTATGEP
AVLPVHAVLA SGKASALEET CELRRDDGTR IAIADACTPL AGADGVMRGA VLIFRDVSSE
RAAAAAVKKA SEYKDQFLAM LGHELRNPLS AICNATRLLE VLVQHNDAKL QRPVDVLARQ
SENLTLLVDD LLDVSRVARG KLAIETSRLD PRSVLRNVLD DMRVKAENRS LRLFAEIAGG
SDDDPGDGEM TILGDSVRLY QIFGNVVGNA IKFTDEGEVR VSMMREGDEI VLRVSDTGMG
MTDEELALVF EPFQQGEQGF HRPQGGLGLG LSVVKGLVVL HDGTVEAHSE GRGQGTTMTL
RFPCAPVRAR TNQPVSNSEP SLSSSSE
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