| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4852 |
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| Symbol | |
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| ID | 8547259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6640324 |
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| End bp | 6642108 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646389525 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003269234 |
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| Protein GI | 262198025 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.464981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACT CAGACGACAC CTTGTCCGCT CCGTCCGCCT CGTCGCCCGC GGGCGCACAC
GATCCGCCTG CGGGCGCACG GACCCAACAC ACGCCCGCGA GCACACCGCT GCTGCCCGTG
CGCATGCTCA ACGAGTACGC CTACTGCCCG CGCTTGTTTC ATCTCGAGTG GGTGCAGCGC
GAGTGGGCTG ACAACGCCTA CACCCTGGAT GGCAAGCGGG TCCACAAGCG CGTGGACAAG
CCCTCGCGGC ATGGCTTGCG CTCTGCCGAC CGCGCGTCCG ACGATAGCGC TTCGAGCAAA
GACGCGGGCC AACCCGAAGA CACCCTGTTT CAGCAGCACG CGCGCAGCGT GGACCTCGGC
GACGACGCGC TCGGCCTGAT CGCGCGCATC GACCTCGTCG AGGCCGAGGG TGACCAGGCC
ACGCCCATCG ACTACAAGCG CGGCAAGCGC CCGGACGTCC CCGGCGGCGC CTACGAGCCC
GAGCGCGTGC AGGTCTGTGC CCAGGGCTTG CTCCTGCGCG CCCATGGATT TCGCAGCGAC
CACGGTATTT TGTACTTCGC CGGCTCGCGC GAGCGCGTGG ACGTGCCCTT CACCGACGCG
CTCGTCGAGC GCACCTTGGC CCTGCGCGAT CAGGCCCTGC AGGCTGCCGA AGCCGAAAAG
CCGCCGTCGC CGCTGGTAGA CAGCCCCAAA TGCCCGCGCT GCTCGCTGGT CGGCATCTGT
CTACCGGACG AGCAGAATGC CCTGCTCGGA CGCAGCACCG AGGGAATTCG TCCACTCGTC
TCGCTACGTG ACGACGCCCT GCCCTTGCAC GTGCAGGAGC ACGGCGCCGT GGTGAGCAAG
CGCGCCGCCG AGCTCGTCAT CAAGCGCAAA GGCAGCGAGC TCGAGCGCGT GCGCATCAAA
GACGTCTCGC GCATCAACCT GCACGGCAGC GCGCACATCA CCTTGCCCGC CCTGCAGACA
GCATTGGGCA ATGGCATTCC CGTCGGCCTA TTCACCTACG GCGGCTGGTA CTACGGGCGT
GCACAGGGAC ATGATCACAA GAACGTGCTC CTGCGTCAGG CGCAGTTTGC CAGCGCGCAG
GACGAGGGGC GCTGTCTGCG CATCGCGCAG CGGCTGGTCC ACGCCAAGAT CAAAAACAGC
CGCGTCATGT TGCGGCGTAA CAGCCGAGCG CTCGATCGAC GGATTCTCGA CGACCTGTCC
GGTCATGCGC GACGCGCGCG TCAGGCCGAC AGCCAGGCCA CCTTGCTCGG CATCGAGGGC
AGCGCCGCGC GCCTGTACTT TCAGAATTTC AGCGGCATGT TGCGCCAGGA CGTGCCGTTT
TCGTTTGACA GTCGCAATCG CCGCCCGCCG CGCGACCCAG TCAACGCGCT GCTGTCGTTT
TCGTACGCGT TGCTCACAGC GGAGTGGACG GCGACCTTGA GCACCGTTGG ATTTGATCCG
TACCAGGGCT TTTATCATCA GCCGCGCTAC GGCCGTCCGT CACTCGCGCT GGACCTGATG
GAGGAGTTTC GACCGCTCAT CGCCGACAGC GTGGTCATCG GTGCGATCAA CAACGGTGTA
CTCGACGAAG ATGATTTCGT CGTGACCGCC ACCGCGGCCG CATTGAAACC CGCGGGGAGG
AAGCGGTTTT TGCAGGCATT CGAGCGCCGC CTCGACGAGC AGGTGACCCA TCCGGTCTTT
GGCTATCGGC TTAGCTATCG CCGGGTACTG GACGTACAGG CGCGGCTGCT GGGACGCTAC
ATCATGGGAG AGATCGATGA GTATCCCGAG TTTGTCACCC GATGA
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| Protein sequence | MNNSDDTLSA PSASSPAGAH DPPAGARTQH TPASTPLLPV RMLNEYAYCP RLFHLEWVQR
EWADNAYTLD GKRVHKRVDK PSRHGLRSAD RASDDSASSK DAGQPEDTLF QQHARSVDLG
DDALGLIARI DLVEAEGDQA TPIDYKRGKR PDVPGGAYEP ERVQVCAQGL LLRAHGFRSD
HGILYFAGSR ERVDVPFTDA LVERTLALRD QALQAAEAEK PPSPLVDSPK CPRCSLVGIC
LPDEQNALLG RSTEGIRPLV SLRDDALPLH VQEHGAVVSK RAAELVIKRK GSELERVRIK
DVSRINLHGS AHITLPALQT ALGNGIPVGL FTYGGWYYGR AQGHDHKNVL LRQAQFASAQ
DEGRCLRIAQ RLVHAKIKNS RVMLRRNSRA LDRRILDDLS GHARRARQAD SQATLLGIEG
SAARLYFQNF SGMLRQDVPF SFDSRNRRPP RDPVNALLSF SYALLTAEWT ATLSTVGFDP
YQGFYHQPRY GRPSLALDLM EEFRPLIADS VVIGAINNGV LDEDDFVVTA TAAALKPAGR
KRFLQAFERR LDEQVTHPVF GYRLSYRRVL DVQARLLGRY IMGEIDEYPE FVTR
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