Gene Hoch_4104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4104 
Symbol 
ID8546505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5647128 
End bp5647946 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID646388780 
Productthiazole biosynthesis family protein 
Protein accessionYP_003268495 
Protein GI262197286 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.225759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.005774 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCGGCCG CGGTTGGCGA AGGGTTCGAC AGACAGATGA CCGCACACAC CGAAGACAGC 
TGGATTCTGG GCGAGCACAC CTTCCACTCG CGCATCATCG TGGGCACCGG CAAGTACGCC
TCGCACGAGG AGACGCGCGA CGCGCTCGCG GCCTCGGGCG CCGAGATGGT GACCGTGGCC
CTGCGCCGCA TCGACTTCCA GGCCGAGGGT CCGAGCCTGC TCGACATCAT CGACCGCGAG
AAGTACATCC TCCTGCCCAA CACGGCGGGT TGCTATAGCG CCGACGAGGC GGTGCGCACC
CTGCACCTGG CGCGCGAGCT GGGCATGGAC GACTTCGTCA AGCTCGAGGT CATCGGCGAT
CCCAAGACCC TGTTCCCCGA CAACACGGCC ACGGTCGAGG CCGCCAGGCG CCTGGTGGAC
GAGGGCTTTC GCGTGCTGCC CTACTGCTCG GACGACCTGG TCACCTGCAA GCGCTTGCAA
GACGTCGGCT GTCTGGCCGT GATGCCGCTG GCCGCGCCCA TCGGCTCCGG CCTGGGCATC
CGCAACCCGC ACAACATCCG CCTGATCATC GAGAACGTCG ACATCCCCGT GATCGTCGAC
GCCGGCGTCG GCACGGCCTC GGATGCGGCC GTGGCCATGG AGCTTGGCTG CACCGCGGTG
CTGATGAACA CCGGCATCGC CGGCGCCCAG CGCCCGGTGC TCATGGCCGA GGCCATGCGC
GAGGCCGTGA GCGGGGGCCG CAAGGCCTTC CTCGCCGGCC GCATGCCGCG CCGCTCGTAC
GCCAACGCCT CTTCGCCCGA GGGCGGCCTG ATCGAGTGA
 
Protein sequence
MPAAVGEGFD RQMTAHTEDS WILGEHTFHS RIIVGTGKYA SHEETRDALA ASGAEMVTVA 
LRRIDFQAEG PSLLDIIDRE KYILLPNTAG CYSADEAVRT LHLARELGMD DFVKLEVIGD
PKTLFPDNTA TVEAARRLVD EGFRVLPYCS DDLVTCKRLQ DVGCLAVMPL AAPIGSGLGI
RNPHNIRLII ENVDIPVIVD AGVGTASDAA VAMELGCTAV LMNTGIAGAQ RPVLMAEAMR
EAVSGGRKAF LAGRMPRRSY ANASSPEGGL IE