Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4066 |
Symbol | |
ID | 8546467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5586290 |
End bp | 5587291 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388743 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein |
Protein accession | YP_003268458 |
Protein GI | 262197249 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.175631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.249827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCA ACCAGCTACA CATCTGCGTC TACCACGCCA CCATGGCCCA GCCCCTGGCC GAGCTGGTGG GCGCGCGCCT CACCGGCGCC CGCGTCAGCG CGGTGGACGA CGTCGCCGCG GACCCGCCCG ATCTCGACAG CATCGACGTG CTCATCGGGT TTCGCTTCCC CCCGGGTCTG TTGGCGCGCA TGCCGCGGCT GCGCCTGCTG CAGCTCACCT CGGCCGGTCA CGACCAGGTG GACGACGAAG ACCTGCCGCC CGGGCTCGTG GTCGCGCACG CCGGCTCGAT TCCGGCGCCC GCGGTGGCCG AGTACGCGCT CATGGGCATG CTGATGTTCG CGCGCAACGG CCACCAGCTC GTGCGGCAGC ACCTGCAGCA CCTGTGGTCG CGTCCCGGCG CCCGGCTCAT CGTCGGCACC ACCGTGGTGA TGCTGGGCTT TGGCCGCATC GGCCGCGAGG TCGCCGAGCG CGCCAGCGCG CTGGGCATGC AGATCATCGC GGTGACGCGC AGCGGCCACG TCCGCGTCCC CGGCGTGCGC TGCGTGCCGG TCGAAGAGCT GTCCACGGTG CTGCCGTCGG CCGACTTCCT GGTCGTGTGC GTGCCCGGCA ACCCGGGGAC GCAGGGCCTG GTCGGCCGCG AAGCCTTTTC GTCCATGCGT CCGGGTTGCT GCCTCATCGA CGTGAGCCGG CCCGGCGTCG TCGACACCGA GGCCCTGGTC GAAGCCCTGG GCACCGGCCG CTGCGGCGGC GCCATGCTCG ACGTCGTCGC CGGCGAGCCG CTCGCCGCCG ATCACCCGCT GTGGCGCGAG CCCGGCGTGT GGATCACGCC GCACTGCGCC TTCGAACAGG ACCGCGAGGT CGAAGCGCTC AGCGCCCTGC TCATCGAAAA CGTGGAACGC CTGCGCAGCG CCCGCCCGCT GCGCAATGTC GTCGCCCGCG ACGGCGTCCC CTCGCATCCG CTTGCCTCCA CGCTCACCAC CGCGCCCACG AGCCTCGGCT AG
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Protein sequence | MSRNQLHICV YHATMAQPLA ELVGARLTGA RVSAVDDVAA DPPDLDSIDV LIGFRFPPGL LARMPRLRLL QLTSAGHDQV DDEDLPPGLV VAHAGSIPAP AVAEYALMGM LMFARNGHQL VRQHLQHLWS RPGARLIVGT TVVMLGFGRI GREVAERASA LGMQIIAVTR SGHVRVPGVR CVPVEELSTV LPSADFLVVC VPGNPGTQGL VGREAFSSMR PGCCLIDVSR PGVVDTEALV EALGTGRCGG AMLDVVAGEP LAADHPLWRE PGVWITPHCA FEQDREVEAL SALLIENVER LRSARPLRNV VARDGVPSHP LASTLTTAPT SLG
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