Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4054 |
Symbol | |
ID | 8546455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5561922 |
End bp | 5566124 |
Gene Length | 4203 bp |
Protein Length | 1400 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 646388731 |
Product | serine/threonine protein kinase |
Protein accession | YP_003268446 |
Protein GI | 262197237 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.736762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCC GGCCGCTCAC CAAGGGAACC GAGATCACGC CCCGCTTCGT GGTCGAGCGC GCCGTGGGCA AGGGCGGCAT GGGCCTGGTG TACCGCGCCC GCGACCGCCG CGTCGGCGGC CTGGTGGCGG TCAAGGTGCT CACCAAGAAG GGCGAGGAGG CGCTCGATCG CTTCGTGCAA GAGGCCGCGG TGCTGGCCGA GATCCAGCAC CCCGGCGTGG TCCGCTACAT CGACCACGGC CGCGCCGACA GCGGCGACGC GTACCTGGCC ATGGAGTGGC TCGAGGGCAT GGATCTGTCG CGCTTTCTGG CGCGCTCGGC CGACGGCTCC TCGCCCGCGC GGCCGCTGCC GGCCGAGTCC GCGCGCGTGG CCCAGGGCTC CGGCGAGCGC CTGCTCCCGC CCGCCATGCC GCCGACCGGC GAGGCCACCG CGCTCACCGA CGCCGCGCCG GTGCGGGCCG AGCGGATGCC GCGGCCGAGC GGCGTGCCGG GCGCGATCCC GCGCCGCCAG CTCAGCCTCG AGGACACCCT GCTGCTCGGC CGCCGGCTGT CGGGCGCGGT CGCCGAGCTG CACCGCCGCG ACCTCGTGCA CCGCGACATC AAGCCCTCGA ACCTGTTTCT GCCCGGCGGC GACATCGCCC AGCTCAAGCT CATCGATCTC GGCGCCGTGT GGCGCATCGT GCCCACCAGC TCGCTCGAGC ACGAGCGCAT GGTCGGCACG CCGCACTACA TGGCGCCCGA GCAGGCCCGG CTGCGCGGCG CCATCACCCC GGCCACCGAC GTGTGGGCCA TCGGCTGCGT GCTGTACTTC GGCCTCACCG GACGCAAGCC CTTCAAGGGC AGCGACCCGG TGGCCATCAT GGCCCGCATC CTGGTCGACG ACCCCGAGCC CGTGAGCGCC CTGCGCCCCG ACGCGCCCGA TGCGCTGGTC GCGCTCATCG CCGAGTGCAT GCGCCGCGAC CCCGCGGAGC GGCCGCGCGA CGCCATGCAC CTGAGCGCGC TGCTCGAGCA GATCATCGCC GACCAGGAGG CCGGCCCCGG CGCGGTCGCC GGGGACGGAC CCGACGCCGG CGAGACCCTG CTCGGCGCCG GCGTCATCCC CGCGCATCTG CTCGCCCGCC GCCCGGCGCA GCTCACCAGC AGCGAGCGCC GCGCCGTGTG CATGGCGCTC GCCGACGCCG GCCACGGGCT CGGCCAGGAG GCGCTCGACT GGACCGCGAG CGCCTCTGGC TGCGAGCTGG CCACCCTGGC CGACGGCACC CTGCTGCTCA CCGCGCCCGG CGCCGGCATC CCCATGGACC AGGCCGCCCG CCTGGCGCGC GCCGCCCTGA GCCTGCGCGC GGCCCAGCCC GGCCTGCGCG TGGCCCTGGC CACCGGCAGC AGCGACGGCC GCGCGGTCGC CGGCGCCGCC GTGGCCGACG CCGCCCGCCG CCTGCGCTCG CTCGCGAGCG GCTGCGTACA CGCCGACGCC CGCACCGCCG CGCTGCTGGC CAGCGGCTTC GAGCTCGCCG CCGACGCCGA GGGCGCCCTG GTGCAGCGCG ACCGCCCGGC CGCGGGCGCG CGCACCCTGC TGGGCAAGAC CACGCCGCTC GTCGGACGCA TGTCCGAGAT GAACACCCTG CTCACCTGCC TCAGCGAATG CCGGCGCGAG CGCCGCGCCC GCGCCATGCT GGTCACCGGC GCCGCCGGCC TGGGCAAGTC GCGGCTGCGC GAGAGCTTCG AGCAGACCAT CGCCGCCGAG CTCAGCGCCG GCAGCGTGCG CGTCATCCGC GCCCGCGGCG ACCTGGCCAG CGCCGGCTCG CCCTTCCTGC TGCTCGCGCC CGCGCTGCGC GCCGCGGCCG GCATCGTCGA CGGCGAGCCC CTGCGCGAGG CCCGGCGCAA GCTGCAGGCG CTGGTCGCCG AGGTCGTGCG CACGCCCAAG CGCCGCCAGC GCGTCACCCT GTTCCTCGGC GAGCTGGCCG GCGTGCCCTT TCCCGACGGC ACCCTCGACG CGCTCGACGC CGCGCGCAGC GATCCCATCC TCATGGGCCA GCTCATGCAG GCGGCCTGGG AGCTGTGGCT CGACGGCCTC ACCGCCCAGG GCCCGGTGGT GCTGCTGCTC GAGGACCTGC ACTGGGGCGA CGCGCCCTCG GTGCGCCTGG TCGACGCCGC GCTCGAGCGC CTCAGCGACC GCCCGCTGAT GGTGCTCGCC ATGGCCCGGC CCGAGGTCCA CGCCGCGTTC CCGCGGCTGT GGTCGCAGCG CGCGTGCGCC GAGCTGTCGC TGGGGCCGCT GGCGCCCGAG GCCGCCGCCC AGCTCGTGCG CGCCGTGCTC GGCGACCAGG TCGCCGATGA CGCGCTCGCC GGCATCGTCG AGCGCGCCGA CGGCAACGCC TTCTTCCTCG AGGAGCTGAT CCGCGGCGCC GCCAGCAGCG ACGAGCGCGG CGCCTTGCCC GAGAACGTCC TGGCCATGGT CCAGGCCCGG CTGCACAGCC TGGGCGCCGA CGCCCGCCGC ATCCTGCGCG CGGCCAGCGT TTTCGGACAG AACTTCTGGG ACGGCGGCGT GGCCGCGCTG TCCGGTCGCG GCGGCGTGTT CCGGCTCGAG GAGTGGCTCG AGGACCTGGT CGCGCGCGAG CTCATCGTGC GCCAGAGCCG CACCCGCATC CCGGGCGAGA CCGAGTACCG CTTCCGCCAC GCGCTGGTTC ACGAGGCCGT CTACGGCATG CTCACGGCCC AGGATCGCCA GCTCGGCCAC GCCCTGGCCG GCGCCTGGCT GGCCCGCGTC GGCGAGCGCG ACAGCCGCAT CCTGGCCGAG CACATGCTGC GCAGCGACGC CCCGGCCAAG GCCCTGCCGC ACCTCTTGCG CGCGGCCGAG CAGGCCATGG AGGGCAACGA CTTCCAGGGC GTCTTGCGGC TGTGCGCGCG CGCCATCGGC GCCGGCGCCG AGGGCGAGCG CCGCGGCCGC CTGCACGCCC TGCAGGCCGC CGCCAGCTTC TGGCTCGGCG ACCACCTCGG CAGCCGCCAC TTCGGCAGCG AGGCCGCGCA GCGCCTGGTG CCCGGCTCGG GCGTGTGGTT CGGGGCCGTG GGCACCGCCA TGGTGTCGAG CTCGCGCCTG GGCGACGCCG CCAGCGTCGA CGCCCTGGCC GCCGCCGTCC TCGACGCGCC CGTGGCCGCC ACCGAGGTCT CGCAGCAGCT CACCAGCCTG TGCCGCATCG CCTTCCAGCT CCTGTTCAAC GGCCACTACG AGCGCGCCGA CCGGCTGCTC GACCGCATCG TCTTGCTCAC CGCCCGCGAC GAGCAGCTCG ACGCCCTCAC CCAGGCCCAG ATCTACCACT TGCAGAGCTT GCGCCGGGCC CTCGACGGCG ACGTCGGCGG CACCCTGCGC CGGCTGTCCA AGGCCGTCGA CGCCTTCGAG CGCGCCGGTG ACCTGCGCAA CGTCGCGCTC GAGCGCAGCT CGCTGGCGTG GTGGTGGGGC GAGCTCGGCT ACCTCAGCCA CGCCATCGAG CTGTGCGAGA GCAACCTGCG CTTCTGCCAG CAGCAGAACA GCCGCCAGGC CATCACCTTC GCGCAGCTCA ACCTCGGCGT GCTCCTGGGC CGCACCCCGC AGGGCGGCGG CCGCGCCCGC TCGCTGCTGG GCAGCGCCAT CGACGCCTGC CGCGCGGTCG GCGACACCCG CCTCGAGGGC TGGGCCTACG TCAACCTGGC CTGCGTCGCC CACAGCGTCG GCGAGTTCCA GGCCGCCGCG CACGCGTCCA CGCGCGCCTC GGCGCTGCTC GAGTCATCGC CCAGCCTGCA CGCCTGGGCG CTGGCCGTGC GCTCGCGCGC CTGCCTGGCC TGCGGCGACG TCACCCAGGC GCGGACCACG GCCGAGCGCG CCACCGCCAT GGCCAAGCGC ATCCGCCTCA TCCACGGCCG CAGCCTGCCG CACCTGGTGC TGGCCCAGGC GCTGCAGGCC GACGCCGACC CCGAGGGCGC CGCGCGCGCC ATCGTGCGCG CCGCCGAGGA GCTGGCCGAG CGCGCCGCCT ACCTCGACCG CGAGGCCTGG CGCGAGCGCT ATCTCGACCG GCCCGAGCAC CGCCAGATCC GCAAGCTGGC GCGCGAGTGG GCGGGCTGGA GCGGCCTCGA CGACAGCCCC AAAGCCGGTG AAGCCGGTGA CGCCGGTGAC ACCGTGGCCG ATATGCCGCG GGCGTTCGAC CCCGCCGACG CCGACAGGGA CACCGACGCC TGA
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Protein sequence | MSIRPLTKGT EITPRFVVER AVGKGGMGLV YRARDRRVGG LVAVKVLTKK GEEALDRFVQ EAAVLAEIQH PGVVRYIDHG RADSGDAYLA MEWLEGMDLS RFLARSADGS SPARPLPAES ARVAQGSGER LLPPAMPPTG EATALTDAAP VRAERMPRPS GVPGAIPRRQ LSLEDTLLLG RRLSGAVAEL HRRDLVHRDI KPSNLFLPGG DIAQLKLIDL GAVWRIVPTS SLEHERMVGT PHYMAPEQAR LRGAITPATD VWAIGCVLYF GLTGRKPFKG SDPVAIMARI LVDDPEPVSA LRPDAPDALV ALIAECMRRD PAERPRDAMH LSALLEQIIA DQEAGPGAVA GDGPDAGETL LGAGVIPAHL LARRPAQLTS SERRAVCMAL ADAGHGLGQE ALDWTASASG CELATLADGT LLLTAPGAGI PMDQAARLAR AALSLRAAQP GLRVALATGS SDGRAVAGAA VADAARRLRS LASGCVHADA RTAALLASGF ELAADAEGAL VQRDRPAAGA RTLLGKTTPL VGRMSEMNTL LTCLSECRRE RRARAMLVTG AAGLGKSRLR ESFEQTIAAE LSAGSVRVIR ARGDLASAGS PFLLLAPALR AAAGIVDGEP LREARRKLQA LVAEVVRTPK RRQRVTLFLG ELAGVPFPDG TLDALDAARS DPILMGQLMQ AAWELWLDGL TAQGPVVLLL EDLHWGDAPS VRLVDAALER LSDRPLMVLA MARPEVHAAF PRLWSQRACA ELSLGPLAPE AAAQLVRAVL GDQVADDALA GIVERADGNA FFLEELIRGA ASSDERGALP ENVLAMVQAR LHSLGADARR ILRAASVFGQ NFWDGGVAAL SGRGGVFRLE EWLEDLVARE LIVRQSRTRI PGETEYRFRH ALVHEAVYGM LTAQDRQLGH ALAGAWLARV GERDSRILAE HMLRSDAPAK ALPHLLRAAE QAMEGNDFQG VLRLCARAIG AGAEGERRGR LHALQAAASF WLGDHLGSRH FGSEAAQRLV PGSGVWFGAV GTAMVSSSRL GDAASVDALA AAVLDAPVAA TEVSQQLTSL CRIAFQLLFN GHYERADRLL DRIVLLTARD EQLDALTQAQ IYHLQSLRRA LDGDVGGTLR RLSKAVDAFE RAGDLRNVAL ERSSLAWWWG ELGYLSHAIE LCESNLRFCQ QQNSRQAITF AQLNLGVLLG RTPQGGGRAR SLLGSAIDAC RAVGDTRLEG WAYVNLACVA HSVGEFQAAA HASTRASALL ESSPSLHAWA LAVRSRACLA CGDVTQARTT AERATAMAKR IRLIHGRSLP HLVLAQALQA DADPEGAARA IVRAAEELAE RAAYLDREAW RERYLDRPEH RQIRKLAREW AGWSGLDDSP KAGEAGDAGD TVADMPRAFD PADADRDTDA
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