Gene Hoch_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4054 
Symbol 
ID8546455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5561922 
End bp5566124 
Gene Length4203 bp 
Protein Length1400 aa 
Translation table11 
GC content76% 
IMG OID646388731 
Productserine/threonine protein kinase 
Protein accessionYP_003268446 
Protein GI262197237 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.736762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC GGCCGCTCAC CAAGGGAACC GAGATCACGC CCCGCTTCGT GGTCGAGCGC 
GCCGTGGGCA AGGGCGGCAT GGGCCTGGTG TACCGCGCCC GCGACCGCCG CGTCGGCGGC
CTGGTGGCGG TCAAGGTGCT CACCAAGAAG GGCGAGGAGG CGCTCGATCG CTTCGTGCAA
GAGGCCGCGG TGCTGGCCGA GATCCAGCAC CCCGGCGTGG TCCGCTACAT CGACCACGGC
CGCGCCGACA GCGGCGACGC GTACCTGGCC ATGGAGTGGC TCGAGGGCAT GGATCTGTCG
CGCTTTCTGG CGCGCTCGGC CGACGGCTCC TCGCCCGCGC GGCCGCTGCC GGCCGAGTCC
GCGCGCGTGG CCCAGGGCTC CGGCGAGCGC CTGCTCCCGC CCGCCATGCC GCCGACCGGC
GAGGCCACCG CGCTCACCGA CGCCGCGCCG GTGCGGGCCG AGCGGATGCC GCGGCCGAGC
GGCGTGCCGG GCGCGATCCC GCGCCGCCAG CTCAGCCTCG AGGACACCCT GCTGCTCGGC
CGCCGGCTGT CGGGCGCGGT CGCCGAGCTG CACCGCCGCG ACCTCGTGCA CCGCGACATC
AAGCCCTCGA ACCTGTTTCT GCCCGGCGGC GACATCGCCC AGCTCAAGCT CATCGATCTC
GGCGCCGTGT GGCGCATCGT GCCCACCAGC TCGCTCGAGC ACGAGCGCAT GGTCGGCACG
CCGCACTACA TGGCGCCCGA GCAGGCCCGG CTGCGCGGCG CCATCACCCC GGCCACCGAC
GTGTGGGCCA TCGGCTGCGT GCTGTACTTC GGCCTCACCG GACGCAAGCC CTTCAAGGGC
AGCGACCCGG TGGCCATCAT GGCCCGCATC CTGGTCGACG ACCCCGAGCC CGTGAGCGCC
CTGCGCCCCG ACGCGCCCGA TGCGCTGGTC GCGCTCATCG CCGAGTGCAT GCGCCGCGAC
CCCGCGGAGC GGCCGCGCGA CGCCATGCAC CTGAGCGCGC TGCTCGAGCA GATCATCGCC
GACCAGGAGG CCGGCCCCGG CGCGGTCGCC GGGGACGGAC CCGACGCCGG CGAGACCCTG
CTCGGCGCCG GCGTCATCCC CGCGCATCTG CTCGCCCGCC GCCCGGCGCA GCTCACCAGC
AGCGAGCGCC GCGCCGTGTG CATGGCGCTC GCCGACGCCG GCCACGGGCT CGGCCAGGAG
GCGCTCGACT GGACCGCGAG CGCCTCTGGC TGCGAGCTGG CCACCCTGGC CGACGGCACC
CTGCTGCTCA CCGCGCCCGG CGCCGGCATC CCCATGGACC AGGCCGCCCG CCTGGCGCGC
GCCGCCCTGA GCCTGCGCGC GGCCCAGCCC GGCCTGCGCG TGGCCCTGGC CACCGGCAGC
AGCGACGGCC GCGCGGTCGC CGGCGCCGCC GTGGCCGACG CCGCCCGCCG CCTGCGCTCG
CTCGCGAGCG GCTGCGTACA CGCCGACGCC CGCACCGCCG CGCTGCTGGC CAGCGGCTTC
GAGCTCGCCG CCGACGCCGA GGGCGCCCTG GTGCAGCGCG ACCGCCCGGC CGCGGGCGCG
CGCACCCTGC TGGGCAAGAC CACGCCGCTC GTCGGACGCA TGTCCGAGAT GAACACCCTG
CTCACCTGCC TCAGCGAATG CCGGCGCGAG CGCCGCGCCC GCGCCATGCT GGTCACCGGC
GCCGCCGGCC TGGGCAAGTC GCGGCTGCGC GAGAGCTTCG AGCAGACCAT CGCCGCCGAG
CTCAGCGCCG GCAGCGTGCG CGTCATCCGC GCCCGCGGCG ACCTGGCCAG CGCCGGCTCG
CCCTTCCTGC TGCTCGCGCC CGCGCTGCGC GCCGCGGCCG GCATCGTCGA CGGCGAGCCC
CTGCGCGAGG CCCGGCGCAA GCTGCAGGCG CTGGTCGCCG AGGTCGTGCG CACGCCCAAG
CGCCGCCAGC GCGTCACCCT GTTCCTCGGC GAGCTGGCCG GCGTGCCCTT TCCCGACGGC
ACCCTCGACG CGCTCGACGC CGCGCGCAGC GATCCCATCC TCATGGGCCA GCTCATGCAG
GCGGCCTGGG AGCTGTGGCT CGACGGCCTC ACCGCCCAGG GCCCGGTGGT GCTGCTGCTC
GAGGACCTGC ACTGGGGCGA CGCGCCCTCG GTGCGCCTGG TCGACGCCGC GCTCGAGCGC
CTCAGCGACC GCCCGCTGAT GGTGCTCGCC ATGGCCCGGC CCGAGGTCCA CGCCGCGTTC
CCGCGGCTGT GGTCGCAGCG CGCGTGCGCC GAGCTGTCGC TGGGGCCGCT GGCGCCCGAG
GCCGCCGCCC AGCTCGTGCG CGCCGTGCTC GGCGACCAGG TCGCCGATGA CGCGCTCGCC
GGCATCGTCG AGCGCGCCGA CGGCAACGCC TTCTTCCTCG AGGAGCTGAT CCGCGGCGCC
GCCAGCAGCG ACGAGCGCGG CGCCTTGCCC GAGAACGTCC TGGCCATGGT CCAGGCCCGG
CTGCACAGCC TGGGCGCCGA CGCCCGCCGC ATCCTGCGCG CGGCCAGCGT TTTCGGACAG
AACTTCTGGG ACGGCGGCGT GGCCGCGCTG TCCGGTCGCG GCGGCGTGTT CCGGCTCGAG
GAGTGGCTCG AGGACCTGGT CGCGCGCGAG CTCATCGTGC GCCAGAGCCG CACCCGCATC
CCGGGCGAGA CCGAGTACCG CTTCCGCCAC GCGCTGGTTC ACGAGGCCGT CTACGGCATG
CTCACGGCCC AGGATCGCCA GCTCGGCCAC GCCCTGGCCG GCGCCTGGCT GGCCCGCGTC
GGCGAGCGCG ACAGCCGCAT CCTGGCCGAG CACATGCTGC GCAGCGACGC CCCGGCCAAG
GCCCTGCCGC ACCTCTTGCG CGCGGCCGAG CAGGCCATGG AGGGCAACGA CTTCCAGGGC
GTCTTGCGGC TGTGCGCGCG CGCCATCGGC GCCGGCGCCG AGGGCGAGCG CCGCGGCCGC
CTGCACGCCC TGCAGGCCGC CGCCAGCTTC TGGCTCGGCG ACCACCTCGG CAGCCGCCAC
TTCGGCAGCG AGGCCGCGCA GCGCCTGGTG CCCGGCTCGG GCGTGTGGTT CGGGGCCGTG
GGCACCGCCA TGGTGTCGAG CTCGCGCCTG GGCGACGCCG CCAGCGTCGA CGCCCTGGCC
GCCGCCGTCC TCGACGCGCC CGTGGCCGCC ACCGAGGTCT CGCAGCAGCT CACCAGCCTG
TGCCGCATCG CCTTCCAGCT CCTGTTCAAC GGCCACTACG AGCGCGCCGA CCGGCTGCTC
GACCGCATCG TCTTGCTCAC CGCCCGCGAC GAGCAGCTCG ACGCCCTCAC CCAGGCCCAG
ATCTACCACT TGCAGAGCTT GCGCCGGGCC CTCGACGGCG ACGTCGGCGG CACCCTGCGC
CGGCTGTCCA AGGCCGTCGA CGCCTTCGAG CGCGCCGGTG ACCTGCGCAA CGTCGCGCTC
GAGCGCAGCT CGCTGGCGTG GTGGTGGGGC GAGCTCGGCT ACCTCAGCCA CGCCATCGAG
CTGTGCGAGA GCAACCTGCG CTTCTGCCAG CAGCAGAACA GCCGCCAGGC CATCACCTTC
GCGCAGCTCA ACCTCGGCGT GCTCCTGGGC CGCACCCCGC AGGGCGGCGG CCGCGCCCGC
TCGCTGCTGG GCAGCGCCAT CGACGCCTGC CGCGCGGTCG GCGACACCCG CCTCGAGGGC
TGGGCCTACG TCAACCTGGC CTGCGTCGCC CACAGCGTCG GCGAGTTCCA GGCCGCCGCG
CACGCGTCCA CGCGCGCCTC GGCGCTGCTC GAGTCATCGC CCAGCCTGCA CGCCTGGGCG
CTGGCCGTGC GCTCGCGCGC CTGCCTGGCC TGCGGCGACG TCACCCAGGC GCGGACCACG
GCCGAGCGCG CCACCGCCAT GGCCAAGCGC ATCCGCCTCA TCCACGGCCG CAGCCTGCCG
CACCTGGTGC TGGCCCAGGC GCTGCAGGCC GACGCCGACC CCGAGGGCGC CGCGCGCGCC
ATCGTGCGCG CCGCCGAGGA GCTGGCCGAG CGCGCCGCCT ACCTCGACCG CGAGGCCTGG
CGCGAGCGCT ATCTCGACCG GCCCGAGCAC CGCCAGATCC GCAAGCTGGC GCGCGAGTGG
GCGGGCTGGA GCGGCCTCGA CGACAGCCCC AAAGCCGGTG AAGCCGGTGA CGCCGGTGAC
ACCGTGGCCG ATATGCCGCG GGCGTTCGAC CCCGCCGACG CCGACAGGGA CACCGACGCC
TGA
 
Protein sequence
MSIRPLTKGT EITPRFVVER AVGKGGMGLV YRARDRRVGG LVAVKVLTKK GEEALDRFVQ 
EAAVLAEIQH PGVVRYIDHG RADSGDAYLA MEWLEGMDLS RFLARSADGS SPARPLPAES
ARVAQGSGER LLPPAMPPTG EATALTDAAP VRAERMPRPS GVPGAIPRRQ LSLEDTLLLG
RRLSGAVAEL HRRDLVHRDI KPSNLFLPGG DIAQLKLIDL GAVWRIVPTS SLEHERMVGT
PHYMAPEQAR LRGAITPATD VWAIGCVLYF GLTGRKPFKG SDPVAIMARI LVDDPEPVSA
LRPDAPDALV ALIAECMRRD PAERPRDAMH LSALLEQIIA DQEAGPGAVA GDGPDAGETL
LGAGVIPAHL LARRPAQLTS SERRAVCMAL ADAGHGLGQE ALDWTASASG CELATLADGT
LLLTAPGAGI PMDQAARLAR AALSLRAAQP GLRVALATGS SDGRAVAGAA VADAARRLRS
LASGCVHADA RTAALLASGF ELAADAEGAL VQRDRPAAGA RTLLGKTTPL VGRMSEMNTL
LTCLSECRRE RRARAMLVTG AAGLGKSRLR ESFEQTIAAE LSAGSVRVIR ARGDLASAGS
PFLLLAPALR AAAGIVDGEP LREARRKLQA LVAEVVRTPK RRQRVTLFLG ELAGVPFPDG
TLDALDAARS DPILMGQLMQ AAWELWLDGL TAQGPVVLLL EDLHWGDAPS VRLVDAALER
LSDRPLMVLA MARPEVHAAF PRLWSQRACA ELSLGPLAPE AAAQLVRAVL GDQVADDALA
GIVERADGNA FFLEELIRGA ASSDERGALP ENVLAMVQAR LHSLGADARR ILRAASVFGQ
NFWDGGVAAL SGRGGVFRLE EWLEDLVARE LIVRQSRTRI PGETEYRFRH ALVHEAVYGM
LTAQDRQLGH ALAGAWLARV GERDSRILAE HMLRSDAPAK ALPHLLRAAE QAMEGNDFQG
VLRLCARAIG AGAEGERRGR LHALQAAASF WLGDHLGSRH FGSEAAQRLV PGSGVWFGAV
GTAMVSSSRL GDAASVDALA AAVLDAPVAA TEVSQQLTSL CRIAFQLLFN GHYERADRLL
DRIVLLTARD EQLDALTQAQ IYHLQSLRRA LDGDVGGTLR RLSKAVDAFE RAGDLRNVAL
ERSSLAWWWG ELGYLSHAIE LCESNLRFCQ QQNSRQAITF AQLNLGVLLG RTPQGGGRAR
SLLGSAIDAC RAVGDTRLEG WAYVNLACVA HSVGEFQAAA HASTRASALL ESSPSLHAWA
LAVRSRACLA CGDVTQARTT AERATAMAKR IRLIHGRSLP HLVLAQALQA DADPEGAARA
IVRAAEELAE RAAYLDREAW RERYLDRPEH RQIRKLAREW AGWSGLDDSP KAGEAGDAGD
TVADMPRAFD PADADRDTDA