| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4049 |
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| Symbol | |
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| ID | 8546450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5557259 |
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| End bp | 5558338 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646388726 |
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| Product | Histone deacetylase |
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| Protein accession | YP_003268441 |
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| Protein GI | 262197232 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.248474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.645592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG GCTACGTTCT CGACGACGTC TTCACCGAGC ACCGACCGCC GGGTTCGCAT
CCCGAGCGGC CCGAGCGTAT CGGCGCGGTG CGGGATGCGC TGCGCGCGGC GCATCTGCGC
GAGCGCGCCA CGCTCCTCCC GGTGCGTGAG GCCAGCGAGG ACGAGCTTGG TCGCGTGCAT
CACGCCGGCT ATCTGTCCGA TCTCACGCGC ACCGTGCCCG GGCAGAGCGG CTGGCTCGAC
GGCGACACCT ACTTCTCGCC CGGGACCTGG GAGGCCGTGC TCAAGGCCGC CGGGGCCGTG
GTCGATGTCG CCCTGGGCGT GCTCGACGCT CGCTTCCAGC GCGGCATGGC GCTGGTGCGG
CCGCCCGGAC ATCACGCCGA GGCCGACCGG GCCATGGGCT TCTGCCTCAT CAACAACATC
GCCGTGGCGG CGGCGGCCGC GCGCGCGGCC GGGGCGGCGC GGGTGGCCAT CGTCGATTGG
GACGTCCACC ACGGCAACGG CACGCAGCAC ATCTTCGAGG AGGATCCCTC GGTGCTGTTC
CTGTCGTGCC ATCAGTACCC GTTCTATCCC GGCACGGGCG CGCCCTCCGA GGTCGGCCGC
GGGGCCGGGG TCGGGGCCAC GGTCAACGTC GGGCTGCCCG CGGGCGCGGG CGATCGCGCG
TACATGGCGA CCATGAACGA GGTCTTTGCG CCCGCGCTGC GGCGCTTTCA GCCCGATATC
ATCCTGCTCT CGGCCGGCTT CGACGCCTAC GTCGATGACC CGCTGGCCGG CATGCGGGTG
AGCCTCGGCG GCTTTCGCGC GCTGGCCGGG ACGCTGGCGC GGCTGGCCGA TGAGCTGTGC
GGCGGTCGGC TGGCGTGCGC GCTCGAGGGC GGATATCACC TCAAGGGGCT GGGGGCCGGG
ACCGTGGCGC TGCTCGATGC CTTCGAGCAT CCCAGCGCTG AGGCCGAGGT GATCGAGGGC
GATGGCGAGG CGCCCGATCC GATCATTGAT TCGCCCGTGC TCGAGCCGCG CGCGCGGGCC
GCGATCGATG CGACCCTGGC CGCGCTCGAT GCCGCCGGCG GCGTGCGCGC GCCGTCGTGA
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| Protein sequence | MAIGYVLDDV FTEHRPPGSH PERPERIGAV RDALRAAHLR ERATLLPVRE ASEDELGRVH
HAGYLSDLTR TVPGQSGWLD GDTYFSPGTW EAVLKAAGAV VDVALGVLDA RFQRGMALVR
PPGHHAEADR AMGFCLINNI AVAAAAARAA GAARVAIVDW DVHHGNGTQH IFEEDPSVLF
LSCHQYPFYP GTGAPSEVGR GAGVGATVNV GLPAGAGDRA YMATMNEVFA PALRRFQPDI
ILLSAGFDAY VDDPLAGMRV SLGGFRALAG TLARLADELC GGRLACALEG GYHLKGLGAG
TVALLDAFEH PSAEAEVIEG DGEAPDPIID SPVLEPRARA AIDATLAALD AAGGVRAPS
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