| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4033 |
|---|
| Symbol | |
|---|
| ID | 8546434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5537757 |
|---|
| End bp | 5538881 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646388710 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003268425 |
|---|
| Protein GI | 262197216 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.659004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.277798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG CCCTGCGCGC GGACGCGCGG ACGACTTCGC GGCTGCCGCG GCCGACGCGC
GCGCTGGCGG CGATGGTGCT GGCGGCGCTC ATGGCGCTGG CCGGCGGCTG CGGCGGTGGC
GCCGAGCTGC GCGGCCGCAG CCAGACGGTG GACTCGCTGG TGGCCACGGC GCGCGAGAAC
GGCGCCGAGC GTTGCGCGCC GGTAGAGCTG GCGCTGGCCG AGAGCCACGT GGCCTTTGCC
AAGCAAGACC TCGACGAAGG CGATCCATTC CGCGCCCGCC GCGAGCTGGA GATCGCCGAG
AGCAACGCCC GCGAGGCGCT GCGCCTGTCG CCCAAGGATC CCTGCGTGCC GCCCGAGGTG
GTCGCCGTGG ACAGCGACGG CGACGGCATC TTCGACGATC GCGACGCGTG CAAGGGCGCG
CCCGAGGACA AGGACGGCTT CGAGGACGAG GACGGCTGCC CCGACCTCGA CAACGATCAG
GACGGCATCG TCGACGCCAG CGACGCCTGC CCGCTCGAGC CCGAGGACAA GGACGGGCTC
GACGACGAGG ACGGCTGCCC CGAAGAGGAC CGCGACGGCG ACATGATCGC CGACAACAAG
GACCAGTGCC CGGACGAGCC CGAGGACAAG GACGGCTTCG CCGACGAGGA CGGCTGCCCC
GACTGCGACA ATGACGGCGA CGGCGTGCCC GAGTGCCCGG TGGTCGTGGA CCAGTGTCCG
AGCAAGGCGG CCAAGACCCC GGACGGCTGT CCGGTTTACA ATCTGGTCAA GGTCACCTCG
AAGAAGATCG AGATCAAGCA GACCATCTAC TTCGAGACCG GCAAGAACAC CATCAAGCCG
GTGTCCTTTG CGCTGCTCAA CGAGGTGGCC ACGGTGCTCA CCGACAACCC CGAGATCGAG
GTGCGCATCG AGGGTCACAC CGACAGCCGC GGCAGCGCCG AGTTCAACAT GGAGCTGAGC
CAGAGCCGGG CCGAGTCGGT GCGCAGCTTC CTCATCGACA AGGGCGTGGA CGGCGACCGC
CTCGAGGCCA AGGGCTACGG CGAGAGCGCG CCCATCGCCA ACAACAACAC CCGCGCCGGC
CAGGCCCAGA ACCGGCGCGT GGAGTTCGTG ATCGTCAGCC GTTAG
|
|---|
| Protein sequence | MSQALRADAR TTSRLPRPTR ALAAMVLAAL MALAGGCGGG AELRGRSQTV DSLVATAREN
GAERCAPVEL ALAESHVAFA KQDLDEGDPF RARRELEIAE SNAREALRLS PKDPCVPPEV
VAVDSDGDGI FDDRDACKGA PEDKDGFEDE DGCPDLDNDQ DGIVDASDAC PLEPEDKDGL
DDEDGCPEED RDGDMIADNK DQCPDEPEDK DGFADEDGCP DCDNDGDGVP ECPVVVDQCP
SKAAKTPDGC PVYNLVKVTS KKIEIKQTIY FETGKNTIKP VSFALLNEVA TVLTDNPEIE
VRIEGHTDSR GSAEFNMELS QSRAESVRSF LIDKGVDGDR LEAKGYGESA PIANNNTRAG
QAQNRRVEFV IVSR
|
|---|
| |