Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4013 |
Symbol | |
ID | 8546409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5505503 |
End bp | 5507362 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646388685 |
Product | serine/threonine protein kinase |
Protein accession | YP_003268405 |
Protein GI | 262197196 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.366631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAGCG CGGAAATCGC CGTAATTTCT CGCCCCTCGC CGTCTTACAT GGACTCCACC AACCCCAGTA CGCCGCTCTC TGTCGTCGCG GGTGACCCCG TCGTGCTCGA AGAGGGCGTG CGCGTGGGCG AGTACGAGAT CGAGGACAGC ATCGGCGAGG GCGGCTTCGG CACCGTGTTC AAGGCCGTGC ACCCGCTCAT CGGCAAGGTG GTGGCCATCA AGGTGCTGCA CCGCCGCTAC TCGGCGCAGC CCGAGATGGT GTCGCGCTTC GTGGCCGAGG CGCGCGCGGT CAACCAGATC CGCCACCGCA ACATCATCGA TATCTTCGCC TTCGGACAGC TCGACGACGG CCGCCACTAC TACGTGATGG AGTACCTCGA GGGCATGACC CTCGAGCAGT ACCTGGGCGA TAGCGGCCGC GTCGGCCTGG TCGAGACCAT CTCGGTGCTG CGCGCGCTGG CGCGGGCGCT CGACGCCGCA CACGCCAAGG GCATCGCGCA CCGCGATCTC AAGCCCGACA ACGTGTTCAT GGTCTTCGAC GAGGACGGCA CCTGCCAGCC CAAGCTCCTC GATTTCGGCA TCGCCAAGCT GCTGCTCGAG GACGCGCCGC AGAAGCACAA GACGCGCACC GGCGCGCCCA TCGGCACGCC GCAGTACATG TCGCCGGAGC AGTGCCGCGG CCGCGATGTC GATCACCGCA CCGACATCTA CGGCTTCGGT ATCATCGCGT ATCGCATGCT CACCGGCGTC GTGCCCTTCG ACGGCGAAGA CTACATGGAC ATCCTGCTGG CCCAGCTCCA GAACCTGGCC GTGCCGCCCT CGCAGCTCGC CGGTCCGCTG CCGCCCGACG TCGACGAGGC GGTGCTGTGG ATGCTCGAGA AGGACCCGGA GGCGCGCCCG CCGAGTCTGG CCGCGGCGGT CCGTCGGCTC GAGGCCGCGG CTGCTGCCGC TGGTCTGACG GTGCCGCGCG GGGCCTCGCT GTCGGTGGTG CCCGCGATGC AGCGCCGCGC CAGCGCGGCC ACCGCGCTGA TTCAGGGGAC GCCGCAGCCG GGCAGCTACC CGCCGCCGAG CAACCCCAGC TACCCGGGCT CGGTGCGCCC CTCGGACAGC CTCAGCTCCT TGGCCCGGGC GTCGATGCGG TACAGCGCCG CGAGCTATCC GCCGCCGGCC ACGGGGCAGG GCTTTGGTCC AGGCCCCGGC TTCGCCGGCT CGGCTCCCTA CGGCATACCG CCGCACGCCG CGGCTCCGGT GACGCTGCAG ACCGCGCCCT CACAGCCCCG CGTGGCCGCG ATGCGGGCGC TGGTCATTGT CCTGGGCCTG GCCGGTGCGG TGCTGATGGG CGTCGTGGTC AACTCGATGC TGGCCGAGCC CGCGCCGGCG AATCCGCGCG CCGATGAGAG CGCGGTGGCG GCTGCCGGCA TCGACACCGG TGAGGGCGAG GGCGAGGGGC CGGAGCGCCC AGGCGAGCAC AGCGACGAGC GTATCCTGGT CGCGGCCGGC GAGGGCGACG AGCCCGGGGT CGGCGAGGGC CAGGAGCCGG GCGGCGAGGG CCAGGTGCTG CGCCTGGTCA CCCTGAGCGT CGCGGGCACG CCGCCGGAGA CCGAAGTCTA CGGGCCCACG GGCCTGCTCG GGGTGGTGCC GGGCAAGGTG CAGCTCCCGG TCGGCGAGGA GCCGGTGGTG CTCACCTTCA AGGCCTCCAA GTATCGCTCG GAGAGCCGCG AGGTCGTGCC CAGCGAGGAT CGCGCGCTGG AGGTCGAGCT CGCGCCCATC CCGCGCGGGC GGTCCAATCG GCGGCCCAAG CAGCGCGGGA ACAAAGTACG GAAGCAACGG GATACCATCG AGAATCCCTT CGACAGATAG
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Protein sequence | MPSAEIAVIS RPSPSYMDST NPSTPLSVVA GDPVVLEEGV RVGEYEIEDS IGEGGFGTVF KAVHPLIGKV VAIKVLHRRY SAQPEMVSRF VAEARAVNQI RHRNIIDIFA FGQLDDGRHY YVMEYLEGMT LEQYLGDSGR VGLVETISVL RALARALDAA HAKGIAHRDL KPDNVFMVFD EDGTCQPKLL DFGIAKLLLE DAPQKHKTRT GAPIGTPQYM SPEQCRGRDV DHRTDIYGFG IIAYRMLTGV VPFDGEDYMD ILLAQLQNLA VPPSQLAGPL PPDVDEAVLW MLEKDPEARP PSLAAAVRRL EAAAAAAGLT VPRGASLSVV PAMQRRASAA TALIQGTPQP GSYPPPSNPS YPGSVRPSDS LSSLARASMR YSAASYPPPA TGQGFGPGPG FAGSAPYGIP PHAAAPVTLQ TAPSQPRVAA MRALVIVLGL AGAVLMGVVV NSMLAEPAPA NPRADESAVA AAGIDTGEGE GEGPERPGEH SDERILVAAG EGDEPGVGEG QEPGGEGQVL RLVTLSVAGT PPETEVYGPT GLLGVVPGKV QLPVGEEPVV LTFKASKYRS ESREVVPSED RALEVELAPI PRGRSNRRPK QRGNKVRKQR DTIENPFDR
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