| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4011 |
|---|
| Symbol | |
|---|
| ID | 8546407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5501392 |
|---|
| End bp | 5502708 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646388683 |
|---|
| Product | PEGA domain protein |
|---|
| Protein accession | YP_003268403 |
|---|
| Protein GI | 262197194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0496099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGGAC GGCGATCTGG GGGCGTCGCC GGGGGCGCGC TCTTCGCCCT GCGAACGGCG
CTGCTGGCGC TGCTGGCGTG GGCGTGCGTC GCGGCGCTGG CGCCGCACTC GGCGTGCGCG
CAGCGCGGCG GCAAGGATGG CGAGGTCGAC GCCAAGGAGC GCGCCGAGGC CGAGCTGTTC
TTCCGCGCCG GCGAGCAAGC CTACGAAGCC GGTCAGTATC TGGTGGCCGC GCAGGCCTTC
GAACAGGCCT ATGAGACCTT GCCGCTGCCG GCGATCGCGT TCTCGACCGC GCAGGCCTAT
CGGCTGCAGT ACTTCATCGA CAAGGAGTCG GCCAACCTGC TGCGCTCGAT CGAGCTCTAC
CGCCGCTACA TCGACTCGGT GGAGCAGGGC GGTCGCCGCG ACGATGCGGC CACCAGCCTG
GCCGAGCTCG AGGTCATCCG CGATCGCTTG CAGCGTGCCG GACGGCTCGA TCCGCGGCGC
CGGGTCGCGA GCGATGAGGG GCGGACGCAG CTCATGGTCA CCACCCAGGT GCCGGGCGCG
ATCGCCAAGA TCGACGACAA GAGCGGCGAG ACGCCGCTGA TCCTCGAGGT CTCGTCTGGC
AAGCACCAGG TCGAGGTCCG CGCCGACGGC TACTTCAGCG CCAAGCAGCA GGCCGTGGCC
GTGAGTGGCC GCCTGGTGGT CGTCGAGGTC GAGCTCAAGC CGCAGGCGGC CAAGATTCAG
CTCGAGGTCG AGCCCGGCGC GACGCTGCAC ATCGATGGCC GTCCGGTGGC GCAGACGCCG
AGCGCCGAGC CGGTGTCGGT GCCGGCGGGC AAGCGTTTCG TCGCCATCAC GCGCCGCGGG
CGCCGGCCGT GGACGCGCGA GCTCGAGCTC GAGCGCAACG CCTCGCTCAC CATCCGCGCC
GATCTCGAGG CCACGACCCA GCGCTCGGCG GCGATCTGGG TGCTGGGCGC CTCGGCGCTG
GCCGCGGTGG GCGCGGGCGC GAGCGGCGTG TTTTGGTATC TGGCCGACGC CGAGGGCGCC
GATTACATCG CCTCGCACGA GGAGCTGTTT CCCGCGGACA AGGTGGCTCT CAGCGATATC
CGGGAGCGCC GCGACGGGCG CCGGGGCATC ACCCTCGGCC TGGTCGGCGC CGCGGTCGCG
ATCGGCGCCA TCGGCGGCGT GCTGTACTGG TTCGACAATC CCCACGTCGA GCAGGGCGGG
CGCTCCAAGG GCGAGGTCTG GGGCGCGGAG GACGACGAGG GCGGCGCCTC CTCGCTGCGC
CTCACGCCCA CCCTCGACGA GCGCGGCGCT GGCTTTGCGG TCTCTGGCCA CTTTTGA
|
|---|
| Protein sequence | MRGRRSGGVA GGALFALRTA LLALLAWACV AALAPHSACA QRGGKDGEVD AKERAEAELF
FRAGEQAYEA GQYLVAAQAF EQAYETLPLP AIAFSTAQAY RLQYFIDKES ANLLRSIELY
RRYIDSVEQG GRRDDAATSL AELEVIRDRL QRAGRLDPRR RVASDEGRTQ LMVTTQVPGA
IAKIDDKSGE TPLILEVSSG KHQVEVRADG YFSAKQQAVA VSGRLVVVEV ELKPQAAKIQ
LEVEPGATLH IDGRPVAQTP SAEPVSVPAG KRFVAITRRG RRPWTRELEL ERNASLTIRA
DLEATTQRSA AIWVLGASAL AAVGAGASGV FWYLADAEGA DYIASHEELF PADKVALSDI
RERRDGRRGI TLGLVGAAVA IGAIGGVLYW FDNPHVEQGG RSKGEVWGAE DDEGGASSLR
LTPTLDERGA GFAVSGHF
|
|---|
| |