| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4007 |
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| Symbol | |
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| ID | 8546403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5498175 |
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| End bp | 5499368 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646388679 |
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| Product | translation elongation factor Tu |
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| Protein accession | YP_003268399 |
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| Protein GI | 262197190 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0206581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.828758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG AGAAATTCAA TAGAACTAAA CCGCACGTCA ATATCGGTAC GATCGGCCAT
GTGGACCATG GCAAGACGAC GCTGACGGCC GCCATCACCA AGACGCAGGC GTCGCAGGGG
CTGGCGAACT TCACGGCGTT CGACCAGATC GACAAGGCGC CGGAAGAGAA GGCGCGCGGA
ATCACGATCT CCACGGCGCA CGTGGAGTAC GAGTCGCCGA ACCGGCACTA CGCGCACGTG
GATTGCCCGG GACACGCCGA CTACATCAAG AACATGATCA CGGGCGCGGC GCAGATGGAC
GGCGCGATCC TGGTGGTGAG CGCGCCGGAC GGAGCGATGC CGCAGACGCG CGAGCACGTG
CTGCTGTCGA AGCAGGTGAA CGTGCCGGCG ATCGTGGTGT TCCTCAACAA GTGCGACATG
ATCGGGGAAG AGGACGCGGA GTTGCTGGAG CTGGTGGAGA TGGAGCTGGC GGAACTGCTG
GAGAAGTACG ACTTCGCCGA GGACTCGCCG ATCATCCGGG GCTCGGCGCT CAAGGCGCTC
GAGGGTGAGG ATTCGGAGTA CGGGACGCAG TCGATCGCGA AGCTGTTGGA GGCGTGTGAC
ACGCACATCC CGGAGCCGGA GCGCGAGGTG GACAAGCCGT TCCTGATGCC GGTGGAGGAC
GTGTTCACGA TCACGGGTCG CGGCACGGTG GTGACCGGCC GCATCGAGCG CGGCATGGTG
AAGGTGGGCG AAGAGGTGGC GATCGTGGGC ATGGGTTCGA CGATGAAGTC GACCTGCACG
GGCGTGGAGA TGTTCCGCAA GCTGCTCGAC GAGGGCCAGG CGGGCGACAA CGTGGGTCTG
CTGCTTCGCG GAATCAAGCG CGAGGACGTG CAGCGCGGGA TGGTGCTGTG CAAGCCCAAC
AGCATCACGC CGCACACCAA GTTCGAGGCG GAGGTGTACG TGCTCAAGAA GGACGAGGGC
GGTCGCCACA CGCCGTTCTT CAACGGCTAC CGGCCGCAGT TCTACTTCCG CACGACGGAC
GTGACCGGCG TCGCGACGCT GCCCGAGGGC ACCGAGATGG TGATGCCGGG CGACAACATC
CAGATGAGCG TGGAGCTGAT CACGCCGATC GCGTGTGAGG AAGGTCTTCG CTTCGCGATT
CGCGAGGGTG GCCGCACTGT CGGCGCCGGC GTCGTCGCCA AAATCGTCGA ATAG
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| Protein sequence | MAKEKFNRTK PHVNIGTIGH VDHGKTTLTA AITKTQASQG LANFTAFDQI DKAPEEKARG
ITISTAHVEY ESPNRHYAHV DCPGHADYIK NMITGAAQMD GAILVVSAPD GAMPQTREHV
LLSKQVNVPA IVVFLNKCDM IGEEDAELLE LVEMELAELL EKYDFAEDSP IIRGSALKAL
EGEDSEYGTQ SIAKLLEACD THIPEPEREV DKPFLMPVED VFTITGRGTV VTGRIERGMV
KVGEEVAIVG MGSTMKSTCT GVEMFRKLLD EGQAGDNVGL LLRGIKREDV QRGMVLCKPN
SITPHTKFEA EVYVLKKDEG GRHTPFFNGY RPQFYFRTTD VTGVATLPEG TEMVMPGDNI
QMSVELITPI ACEEGLRFAI REGGRTVGAG VVAKIVE
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