Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4000 |
Symbol | |
ID | 8546396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5494864 |
End bp | 5495208 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646388672 |
Product | ribosomal protein L22 |
Protein accession | YP_003268392 |
Protein GI | 262197183 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0091] Ribosomal protein L22 |
TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.248751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.644151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGCGA GAGCAGTCGT CAAACATATC TCAATGTCCC CGCGCAAGAT GCGCGTGGTG GCGAACATGG TGCGCGGAGA GCGCGTCGAG GAGGCGCTGG CCTCCCTGCG CTTCATGCCG AAGAAGGCTG CCCGCCTCAT CGCCAAGGCG CTGGAGTCGG CTGCCGCAAA CGCCGAGGAC AAGTCCGGCG GTGACGTCGA TATCGATTCG CTGGTCATCG AGGGCATCTA CGTGGACGGC GGACCCATCA TCAAGCGCTG GATGCCGCGG GCCATGGGTC GGGCAAACCG CATCAATCAC CGCACCAGCC ACCTCACGGT GGTCGTCGGT GATGGCAACG ACTGA
|
Protein sequence | MQARAVVKHI SMSPRKMRVV ANMVRGERVE EALASLRFMP KKAARLIAKA LESAAANAED KSGGDVDIDS LVIEGIYVDG GPIIKRWMPR AMGRANRINH RTSHLTVVVG DGND
|
| |