Gene Hoch_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3995 
Symbol 
ID8546391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5492838 
End bp5493206 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content66% 
IMG OID646388667 
Productribosomal protein L14 
Protein accessionYP_003268387 
Protein GI262197178 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID[TIGR01067] ribosomal protein L14, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.219417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.669985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAGA CTTCCTCGGT TCTCGACGTC GCCGACAACA GCGGCGCCAA GAAGCTCTAC 
TGCATCAAGG TGCTCGGTGG CTCGCGTCGC CGCTACGCCT CGGTCGGCGA CATCGTCGTC
GCCTCGGTGC GGGAAGCGAT CCCCGGTTCG AAGGTCAAGA AGGGCGACGT GGCGCGCGCG
GTCATCGTGC GCACGGCCAA GGAGATCGCC CGCCCCGACG GCAGCTTCAT CCGCTTCGAC
GGCAACTCCG CCGTGCTGAT CAACAAAGAG AACGAGCCCA TCGGGACCCG CATCTTCGGG
CCCGTTGCGC GCGAGCTCCG GGCCAAGCGC TTCATGAAGA TCGTCTCGCT GGCCCCTGAG
GTGCTGTGA
 
Protein sequence
MIQTSSVLDV ADNSGAKKLY CIKVLGGSRR RYASVGDIVV ASVREAIPGS KVKKGDVARA 
VIVRTAKEIA RPDGSFIRFD GNSAVLINKE NEPIGTRIFG PVARELRAKR FMKIVSLAPE
VL