Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3971 |
Symbol | |
ID | 8546367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5471842 |
End bp | 5472357 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646388643 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_003268363 |
Protein GI | 262197154 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0049551 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.392772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGTT CCCTAGCCAT CGCGATTCTC GGCGCTGCTC TCATCATCGC CGGTATGGTC ACCGCCGACG CCCAGCCCCG TGGCAGCGAG AAGATCGCCT ACGTCGACCT GGAGCGCACC CTGATCGAGA CCCCGGCCGG CAAGCGCGCC AGCGCGCGCT TCGAGAAGAG CCTCAAGGCC AAGCAGAACG AGCTCGATAA GGAGCGCAAA GCGCTCGAGC AGTTCCAGGC CGAGCTCGAG AAGCAGGCCG CGATGCTCAA GCCCGAGGTG CGGGCGCAGC GCCAGCGCGA GTTCCAGCAG CGCGCGGCCA AGCTGCAAGA GTCGTTCATG AAGTTCCAGA GCGAGCTGGC CAACGAGCGC GCCAAGTTGA TTCAGGAAGT GCTCAAGAAG GCCGGCCCGG TGATCGAGAC GGTGGCCAAA GAGAAGGGCT ACCAGGTCGT GGTCGACCGC GCCGCCGTCA TCTGGGCCAA CGACGCGCTC GACATCACCG CCGAGATCAA TCGCCGCATC AAGTAG
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Protein sequence | MHRSLAIAIL GAALIIAGMV TADAQPRGSE KIAYVDLERT LIETPAGKRA SARFEKSLKA KQNELDKERK ALEQFQAELE KQAAMLKPEV RAQRQREFQQ RAAKLQESFM KFQSELANER AKLIQEVLKK AGPVIETVAK EKGYQVVVDR AAVIWANDAL DITAEINRRI K
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