| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3956 |
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| Symbol | |
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| ID | 8546352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5454311 |
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| End bp | 5455678 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388628 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003268348 |
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| Protein GI | 262197139 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.382581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCATT TGACCGGGAC GCGCATCAAT CCGGGCGTCA AGCCAGCGAC GGTCAACTTG
CGCCGCTGCA AGCTGGTGGT GGTCAAGGGG CCGCAGCGCG GTACCGAATA CCTCATCGCG
GCCGATCGCA TCCGCGTGGG CAAGGCCGCG GGCAACGATC TCGTGGTCAC CGACGAGACC
GTGTCGCGCG AGCACTTCGA GATCGTACGC GACGCCAAGG GCTACCTCTT GCGCGATCTG
GGCTCGACCA ACGGCACCTT CCTCGACGGC GCCGAGATCA AAGAGGCCTA CCTGCGCGCC
GGCTCGGTGG TGGCGGCCGG GGCCACCGAG CTGAAATTCA CGCCCTTCGA GGAGCGCATC
GAGATCCTGC CCTCGGAGCG CGAATCGCTG GGCGAGATGG TCGGGCGCTC GCTGCAGATC
CGCGAGATCT TCGGCCTGGT CGAGCGCATC GCGCCGACCG ACGCCACGGT GCTGATCGAG
GGCGAGACCG GCACCGGCAA GGACCTCATC GCGCGCGCCC TGCACGCGCT GTCGCCGCGT
CGCGAGCAGC CCTTCATCGT GGTCGACTGC GGCGCGGTCT CGGGCACGCT GATCGAGAGC
GAGCTCTTCG GCCACGAGAA GGGCGCGTTC ACGGGCGCGG TGAGCACGCG CCAGGGCGCG
TTCGAGTTGG CCCACGGGGG GACGGTGTTC CTCGATGAGA TGGGCGAGCT GTCGCTCGAC
CTGCAGCCCA AGCTGTTGCG CGTGCTCGAG CAGCGCGAGT TTCGCCGCGT GGGCGGCTCG
AAGACCATCC AGGCCGATCT CCGGGTCATC GCCGCTACCC GCAAGGATCT GCGCAGCGAG
GTCGAGAAGG GCAAGTTCCG CGAGGATCTG TACTTTCGCC TCAACGTCGT GCCCATGGTC
GCGCCGCCGC TGCGCGAGCG CAAAGGCGAC ATCCCGCTGC TGGTTGAGCA CTTCCTCGAC
AAGCTCACGC CGGCCGGCGC GCAGCGGCCG GCGCTCGGCG ACGACACCGT GGCCGCGCTC
ACGGCCCACG ACTGGCCGGG CAACATCCGC GAGCTGCGCA ATATCATCGA GCGCGCGCTG
GCGCTGGGGC GCGATCCCGG ACACCTGGTC GCCCCGCTGG GCGGCGCGCT GGCCGCGGGC
GGGGCAGGGG CCGGCGCCGG GCCGCAGCCG GAGCTGTCGT TTGCGCCCGA TCTGTCGTTT
CGCGAGCAAA AGGAGCGCTG GGTCGAGACC TTCGAGCGGC GCTATCTGCA GTGGCTCATC
GCCCGCGCCG AGGGCAACAT CTCCAAGGCG GCGCGCGACG CGGACATGGA CCGCAAGTAC
CTGCACAAGC TGCTCAAGAA GTACGGCATC GAGCCCGGCG GCTCGTGA
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| Protein sequence | MEHLTGTRIN PGVKPATVNL RRCKLVVVKG PQRGTEYLIA ADRIRVGKAA GNDLVVTDET
VSREHFEIVR DAKGYLLRDL GSTNGTFLDG AEIKEAYLRA GSVVAAGATE LKFTPFEERI
EILPSERESL GEMVGRSLQI REIFGLVERI APTDATVLIE GETGTGKDLI ARALHALSPR
REQPFIVVDC GAVSGTLIES ELFGHEKGAF TGAVSTRQGA FELAHGGTVF LDEMGELSLD
LQPKLLRVLE QREFRRVGGS KTIQADLRVI AATRKDLRSE VEKGKFREDL YFRLNVVPMV
APPLRERKGD IPLLVEHFLD KLTPAGAQRP ALGDDTVAAL TAHDWPGNIR ELRNIIERAL
ALGRDPGHLV APLGGALAAG GAGAGAGPQP ELSFAPDLSF REQKERWVET FERRYLQWLI
ARAEGNISKA ARDADMDRKY LHKLLKKYGI EPGGS
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